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1bfv

MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI

Method: X-RAY DIFFRACTION D_max: 58.1 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1bfv
deposition_date	1997-05-27
title	MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI
keywords	IMMUNOGLOBULIN, FV FRAGMENT, STEROID HORMONE, FINE SPECIFICITY; IMMUNOGLOBULIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	18.65 Å
rg_electron	17.48 Å
i0	12405500.00
molecular_weight	26149.0 kDa
excluded_volume	32589 Å³
envelope_volume	36250 Å³
shell_volume	17433 Å³
envelope_diameter	59.5 Å
shell_rg	23.60 Å
envelope_rg	17.78 Å
shape_rg	17.44 Å
total_rg	18.49 Å
total_atoms	1830
n_residues	232
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	58.1 Å
rg_real	18.55 Å
rg_real_error	0.21 Å
i0_real	1.2410e+07
i0_real_error	1.2790e+05
rg_reciprocal	18.56 Å
i0_reciprocal	12410000.0000
total_estimate	0.9021
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	23.9 Å
skewness	0.173
kurtosis	-0.435
angular_range	— – 0.4250 Å⁻¹
current_alpha	0.0000
highest_alpha	3540000.0000
n_real_points	74
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.921; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.996; Smooth: 0.964

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4. Crystallography & Experiment

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5. Entities & Polymer Info (5)

Entity 1 polymer

description	FV4155
formula_weight	12438.0 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	L
atom_count	2012

DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR

Source

organism	Mus musculus
common_name	house mouse
ncbi_taxonomy_id	10090
host_organism	Escherichia coli

Entity 2 polymer

description	FV4155
formula_weight	13191.8 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	H

QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS

Source

organism	Mus musculus
common_name	house mouse
ncbi_taxonomy_id	10090
host_organism	Escherichia coli

Entity 3 non-polymer

description	ZINC ION
formula_weight	65.4 kDa
src_method	syn
entity_count	3

Entity 4 non-polymer

description	ESTRIOL 3-(B-D-GLUCURONIDE)
formula_weight	464.5 kDa
src_method	syn
entity_count	1

Entity 5 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	182

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6. Citations (1)

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length_a	89.900 Å
length_b	89.900 Å
length_c	59.900 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 4 21 2
int_tables_number	90
crystal_system	—

resolution	2.100 Å
resolution_low	10.000 Å
r_factor	—
r_work	0.1870
r_free	0.2710

fit	/app/data/saxs_computation/bf/1bfv/1bfv.fit
pddf	/app/data/pr_computation/bf/1bfv/1bfv.pr.out
profile	/app/data/saxs_computation/bf/1bfv/1bfv.dat

MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (5)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

Entity 3 non-polymer

Entity 4 non-polymer

Entity 5 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)