← Back to search

1cfv

MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI

Method: X-RAY DIFFRACTION D_max: 67.1 Å Quality: GOOD

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	1cfv
deposition_date	1997-04-11
title	MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI
keywords	FV FRAGMENT, STEROID HORMONE, FINE SPECIFICITY, IMMUNOGLOBULIN; IMMUNOGLOBULIN
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	18.66 Å
rg_electron	17.50 Å
i0	12432600.00
molecular_weight	26219.0 kDa
excluded_volume	32672 Å³
envelope_volume	36456 Å³
shell_volume	17469 Å³
envelope_diameter	57.7 Å
shell_rg	23.73 Å
envelope_rg	17.87 Å
shape_rg	17.47 Å
total_rg	18.51 Å
total_atoms	1835
n_residues	232
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	67.1 Å
rg_real	18.56 Å
rg_real_error	0.52 Å
i0_real	1.2430e+07
i0_real_error	1.8030e+05
rg_reciprocal	18.58 Å
i0_reciprocal	12430000.0000
total_estimate	0.7738
solution_quality	GOOD a GOOD solution
n_peaks	3
r_peak_primary	23.9 Å
skewness	0.170
kurtosis	-0.447
angular_range	— – 0.4250 Å⁻¹
current_alpha	0.0000
highest_alpha	3668000.0000
n_real_points	74
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.693; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.975; Smooth: 0.000

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (5)

Entity 1 polymer

description	MONOCLONAL ANTIBODY FV4155
formula_weight	12438.0 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	L
atom_count	2021

DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR

Source

organism	Mus musculus
common_name	house mouse
ncbi_taxonomy_id	10090
host_organism	Escherichia coli

Entity 2 polymer

description	MONOCLONAL ANTIBODY FV4155
formula_weight	13191.8 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	H

QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS

Source

organism	Mus musculus
common_name	house mouse
ncbi_taxonomy_id	10090
host_organism	Escherichia coli

Entity 3 non-polymer

description	ZINC ION
formula_weight	65.4 kDa
src_method	syn
entity_count	3

Entity 4 non-polymer

description	ESTRONE BETA-D-GLUCURONIDE
formula_weight	446.5 kDa
src_method	syn
entity_count	1

Entity 5 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	186

▶

6. Citations (1)

▶

length_a	90.000 Å
length_b	90.000 Å
length_c	59.600 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 4 21 2
int_tables_number	90
crystal_system	—

resolution	2.100 Å
resolution_low	10.000 Å
r_factor	—
r_work	0.1780
r_free	0.2470

fit	/app/data/saxs_computation/cf/1cfv/1cfv.fit
pddf	/app/data/pr_computation/cf/1cfv/1cfv.pr.out
profile	/app/data/saxs_computation/cf/1cfv/1cfv.dat

MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (5)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

Entity 3 non-polymer

Entity 4 non-polymer

Entity 5 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)