IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI

entry_id	1c04
deposition_date	1999-07-14
title	IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
keywords	LOW RESOLUTION MODEL, LARGE RIBOSOME UNIT, RIBOSOME; RIBOSOME
method	X-RAY DIFFRACTION

rg_guinier	58.51 Å
rg_electron	64.80 Å
i0	153885000.00
molecular_weight	81179.0 kDa
excluded_volume	92874 ų
envelope_volume	198120 ų
shell_volume	30972 ų
envelope_diameter	202.3 Å
shell_rg	52.11 Å
envelope_rg	62.69 Å
shape_rg	64.80 Å
total_rg	64.38 Å
total_atoms	5570
n_residues	572
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	119.0 Å
rg_real	42.39 Å
rg_real_error	0.39 Å
i0_real	1.3040e+08
i0_real_error	2.0980e+06
rg_reciprocal	56.82 Å
i0_reciprocal	153000000.0000
total_estimate	0.5749
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	30.8 Å
skewness	0.229
kurtosis	-0.924
angular_range	— – 0.1350 Å−1
current_alpha	1.2640
highest_alpha	1450000.0000
n_real_points	28
gnom_version	4.1.3
quality_criteria	AN1: 0.020; Oscil: 0.972; Stabil: 0.966; Sysdev: 0.000; Positv: 1.000; Valcen: 0.659; Smooth: 0.000

Unit Cell

length_a	212.000 Å
length_b	301.400 Å
length_c	576.300 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	C 2 2 21
int_tables_number	20
crystal_system	—

Refinement

resolution	5.000 Å
resolution_low	60.000 Å
r_factor	—
r_work	—
r_free	—

Files (7)

• pr_distribution /app/data/pr_computation/c0/1c04/pr_distribution.json
• pr_output /app/data/pr_computation/c0/1c04/1c04.pr.out
• pr_plot /app/data/visualization/pr_computation/c0/1c04/1c04_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/c0/1c04/1c04.dat
• saxs_fit /app/data/saxs_computation/c0/1c04/1c04.fit
• saxs_log /app/data/saxs_computation/c0/1c04/1c04.log
• saxs_plot /app/data/visualization/saxs_computation/c0/1c04/1c04_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/c0/1c04/1c04.fit
pddf	/app/data/pr_computation/c0/1c04/1c04.pr.out
profile	/app/data/saxs_computation/c0/1c04/1c04.dat