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1c9t

COMPLEX OF BDELLASTASIN WITH BOVINE TRYPSIN

Method: X-RAY DIFFRACTION D_max: 156.2 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1c9t
deposition_date	1999-08-03
title	COMPLEX OF BDELLASTASIN WITH BOVINE TRYPSIN
keywords	COMPLEX (HYDROLASE-INHIBITOR), HYDROLASE, INHIBITOR, ANTISTASIN, PLASMIN, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HYDROLASE/HYDROLASE INHIBITOR
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	49.61 Å
rg_electron	49.40 Å
i0	491842000.00
molecular_weight	173710.0 kDa
excluded_volume	213360 Å³
envelope_volume	326560 Å³
shell_volume	56424 Å³
envelope_diameter	163.2 Å
shell_rg	52.65 Å
envelope_rg	46.82 Å
shape_rg	49.41 Å
total_rg	49.52 Å
total_atoms	12078
n_residues	1656
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	156.2 Å
rg_real	49.45 Å
rg_real_error	1.62 Å
i0_real	4.9180e+08
i0_real_error	9.7480e+06
rg_reciprocal	49.61 Å
i0_reciprocal	491900000.0000
total_estimate	0.8154
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	68.3 Å
skewness	0.079
kurtosis	-0.384
angular_range	— – 0.1600 Å⁻¹
current_alpha	0.0000
highest_alpha	13180000.0000
n_real_points	33
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.673; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.579

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	TRYPSIN
formula_weight	23324.3 kDa
ec_number	3.4.21.4
src_method	nat
entity_count	6

Polymer

type	polypeptide(L)
strand_id	A,B,C,D,E,F
atom_count	12224

IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN

Entity 2 polymer

description	BDELLASTASIN
formula_weight	6351.2 kDa
src_method	man
entity_count	6

Polymer

type	polypeptide(L)
strand_id	G,H,I,J,K,L

FDVNSHTTPCGPVTCSGAQMCEVDKCVCSDLHCKVKCEHGFKKDDNGCEYACICADAPQ

Source

organism	Hirudo medicinalis
common_name	medicinal leech
ncbi_taxonomy_id	6421
host_organism	Saccharomyces cerevisiae

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	146

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6. Citations (3)

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length_a	95.220 Å
length_b	108.780 Å
length_c	95.710 Å
angle_alpha	90.00 °
angle_beta	93.70 °
angle_gamma	90.00 °
z_pdb	12

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	3.300 Å
resolution_low	8.000 Å
r_factor	0.2080
r_work	0.2080
r_free	0.2870

fit	/app/data/saxs_computation/c9/1c9t/1c9t.fit
pddf	/app/data/pr_computation/c9/1c9t/1c9t.pr.out
profile	/app/data/saxs_computation/c9/1c9t/1c9t.dat

COMPLEX OF BDELLASTASIN WITH BOVINE TRYPSIN

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Entity 2 polymer

Polymer

Source

Entity 3 water

6. Citations (3)

7. Files & Curves (10)

Files (7)

Curves (3)