DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B

entry_id	1cit
deposition_date	1999-04-05
title	DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B
keywords	;ORPHAN NUCLEAR RECEPTOR, EARLY IMMEDIATE RESPONSE GENE PRODUCT, TRANSCRIPTION FACTOR, MONOMERIC PROTEIN-DNA COMPLEX, MINOR GROOVE INTERACTIONS, PROTEIN/DNA, TRANSCRIPTION-DNA COMPLEX ;; TRANSCRIPTION/DNA
method	X-RAY DIFFRACTION

rg_guinier	17.64 Å
rg_electron	16.90 Å
i0	13231400.00
molecular_weight	19896.0 kDa
excluded_volume	21718 ų
envelope_volume	27533 ų
shell_volume	14307 ų
envelope_diameter	63.2 Å
shell_rg	22.12 Å
envelope_rg	17.26 Å
shape_rg	16.86 Å
total_rg	17.66 Å
total_atoms	1342
n_residues	121
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	61.3 Å
rg_real	17.65 Å
rg_real_error	0.43 Å
i0_real	1.3230e+07
i0_real_error	1.7430e+05
rg_reciprocal	17.65 Å
i0_reciprocal	13230000.0000
total_estimate	0.8632
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	20.4 Å
skewness	0.398
kurtosis	-0.163
angular_range	— – 0.4500 Å−1
current_alpha	0.0000
highest_alpha	1210000.0000
n_real_points	76
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.769; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.929; Smooth: 0.982

Unit Cell

length_a	53.420 Å
length_b	34.240 Å
length_c	56.260 Å
angle_alpha	90.00 °
angle_beta	109.13 °
angle_gamma	90.00 °
z_pdb	2

Symmetry

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

Refinement

resolution	2.700 Å
resolution_low	18.000 Å
r_factor	—
r_work	0.2190
r_free	0.2950

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/ci/1cit/pr_distribution.json
• pr_output /app/data/pr_computation/ci/1cit/1cit.pr.out
• pr_plot /app/data/visualization/pr_computation/ci/1cit/1cit_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/ci/1cit/1cit.dat
• saxs_fit /app/data/saxs_computation/ci/1cit/1cit.fit
• saxs_log /app/data/saxs_computation/ci/1cit/1cit.log
• saxs_plot /app/data/visualization/saxs_computation/ci/1cit/1cit_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/ci/1cit/1cit.fit
pddf	/app/data/pr_computation/ci/1cit/1cit.pr.out
profile	/app/data/saxs_computation/ci/1cit/1cit.dat