VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH AN AFFINITY MATURED ANTIBODY

entry_id	1cz8
deposition_date	1999-09-01
title	VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH AN AFFINITY MATURED ANTIBODY
keywords	COMPLEX (ANTIBODY-ANTIGEN), CYSTINE KNOT, FAB FRAGMENT, IMMUNE SYSTEM; IMMUNE SYSTEM
method	X-RAY DIFFRACTION

rg_guinier	55.93 Å
rg_electron	57.57 Å
i0	199320000.00
molecular_weight	115960.0 kDa
excluded_volume	144400 ų
envelope_volume	207850 ų
shell_volume	34322 ų
envelope_diameter	195.4 Å
shell_rg	47.51 Å
envelope_rg	57.07 Å
shape_rg	57.57 Å
total_rg	57.25 Å
total_atoms	8158
n_residues	1050
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	204.1 Å
rg_real	56.98 Å
rg_real_error	2.64 Å
i0_real	1.9930e+08
i0_real_error	4.5370e+06
rg_reciprocal	55.00 Å
i0_reciprocal	198700000.0000
total_estimate	0.5708
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	29.1 Å
skewness	0.532
kurtosis	-0.765
angular_range	— – 0.1400 Å−1
current_alpha	0.0002
highest_alpha	6596000.0000
n_real_points	29
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.122; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.050; Smooth: 0.000

Unit Cell

length_a	89.120 Å
length_b	66.400 Å
length_c	138.750 Å
angle_alpha	90.00 °
angle_beta	94.70 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

Refinement

resolution	2.400 Å
resolution_low	20.000 Å
r_factor	0.2080
r_work	0.2080
r_free	0.2670

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/cz/1cz8/pr_distribution.json
• pr_output /app/data/pr_computation/cz/1cz8/1cz8.pr.out
• pr_plot /app/data/visualization/pr_computation/cz/1cz8/1cz8_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/cz/1cz8/1cz8.dat
• saxs_fit /app/data/saxs_computation/cz/1cz8/1cz8.fit
• saxs_log /app/data/saxs_computation/cz/1cz8/1cz8.log
• saxs_plot /app/data/visualization/saxs_computation/cz/1cz8/1cz8_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/cz/1cz8/1cz8.fit
pddf	/app/data/pr_computation/cz/1cz8/1cz8.pr.out
profile	/app/data/saxs_computation/cz/1cz8/1cz8.dat