CRYSTAL STRUCTURE OF DEATH RECEPTOR 5 (DR5) BOUND TO APO2L/TRAIL

entry_id	1d0g
deposition_date	1999-09-09
title	CRYSTAL STRUCTURE OF DEATH RECEPTOR 5 (DR5) BOUND TO APO2L/TRAIL
keywords	APOPTOSIS, BINDING AND SPECIFICITY, LIGAND-RECEPTOR COMPLEX, TNF RECEPTOR FAMILY; APOPTOSIS
method	X-RAY DIFFRACTION

rg_guinier	28.90 Å
rg_electron	27.61 Å
i0	143528000.00
molecular_weight	89621.0 kDa
excluded_volume	109780 ų
envelope_volume	138690 ų
shell_volume	40525 ų
envelope_diameter	104.6 Å
shell_rg	36.08 Å
envelope_rg	28.15 Å
shape_rg	27.55 Å
total_rg	28.56 Å
total_atoms	6271
n_residues	781
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	95.4 Å
rg_real	28.76 Å
rg_real_error	0.63 Å
i0_real	1.4350e+08
i0_real_error	1.9500e+06
rg_reciprocal	28.82 Å
i0_reciprocal	143500000.0000
total_estimate	0.8840
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	36.4 Å
skewness	0.166
kurtosis	-0.426
angular_range	— – 0.2750 Å−1
current_alpha	0.0000
highest_alpha	16130000.0000
n_real_points	56
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.832; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.992

Unit Cell

length_a	66.818 Å
length_b	111.019 Å
length_c	130.807 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	12

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	2.400 Å
resolution_low	30.000 Å
r_factor	—
r_work	0.2220
r_free	0.2670

Diffraction

temperature

93.0 K

Files (7)

• pr_distribution /app/data/pr_computation/d0/1d0g/pr_distribution.json
• pr_output /app/data/pr_computation/d0/1d0g/1d0g.pr.out
• pr_plot /app/data/visualization/pr_computation/d0/1d0g/1d0g_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/d0/1d0g/1d0g.dat
• saxs_fit /app/data/saxs_computation/d0/1d0g/1d0g.fit
• saxs_log /app/data/saxs_computation/d0/1d0g/1d0g.log
• saxs_plot /app/data/visualization/saxs_computation/d0/1d0g/1d0g_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/d0/1d0g/1d0g.fit
pddf	/app/data/pr_computation/d0/1d0g/1d0g.pr.out
profile	/app/data/saxs_computation/d0/1d0g/1d0g.dat