CRYSTAL STRUCTURE OF THE D3B SUBCOMPLEX OF THE HUMAN CORE SNRNP DOMAIN AT 2.0A RESOLUTION

entry_id	1d3b
deposition_date	1998-12-22
title	CRYSTAL STRUCTURE OF THE D3B SUBCOMPLEX OF THE HUMAN CORE SNRNP DOMAIN AT 2.0A RESOLUTION
keywords	SNRNP, SPLICING, SM, CORE SNRNP DOMAIN, SYSTEMIC LUPUS ERYTHEMATOSUS, SLE, RNA BINDING PROTEIN; RNA BINDING PROTEIN
method	X-RAY DIFFRACTION

rg_guinier	34.78 Å
rg_electron	34.78 Å
i0	191389000.00
molecular_weight	110110.0 kDa
excluded_volume	137790 ų
envelope_volume	179760 ų
shell_volume	44534 ų
envelope_diameter	118.3 Å
shell_rg	40.01 Å
envelope_rg	34.26 Å
shape_rg	34.79 Å
total_rg	35.13 Å
total_atoms	7678
n_residues	946
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	116.5 Å
rg_real	34.89 Å
rg_real_error	0.70 Å
i0_real	1.9140e+08
i0_real_error	2.9340e+06
rg_reciprocal	34.83 Å
i0_reciprocal	191400000.0000
total_estimate	0.8733
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	35.5 Å
skewness	0.420
kurtosis	-0.458
angular_range	— – 0.2300 Å−1
current_alpha	0.0001
highest_alpha	31970000.0000
n_real_points	47
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.824; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.971; Smooth: 0.907

Unit Cell

length_a	107.350 Å
length_b	108.450 Å
length_c	110.420 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	24

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	2.000 Å
resolution_low	20.000 Å
r_factor	—
r_work	0.2130
r_free	0.2650

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/d3/1d3b/pr_distribution.json
• pr_output /app/data/pr_computation/d3/1d3b/1d3b.pr.out
• pr_plot /app/data/visualization/pr_computation/d3/1d3b/1d3b_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/d3/1d3b/1d3b.dat
• saxs_fit /app/data/saxs_computation/d3/1d3b/1d3b.fit
• saxs_log /app/data/saxs_computation/d3/1d3b/1d3b.log
• saxs_plot /app/data/visualization/saxs_computation/d3/1d3b/1d3b_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/d3/1d3b/1d3b.fit
pddf	/app/data/pr_computation/d3/1d3b/1d3b.pr.out
profile	/app/data/saxs_computation/d3/1d3b/1d3b.dat