;CRYSTAL STRUCTURE OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H AT 1.9 ANGSTROMS RESOLUTION: ACTIVE SITE GEOMETRY AND SUBSTRATE RECOGNITION ;

Method: X-RAY DIFFRACTION D_max: 62.4 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1edt
deposition_date	1995-03-31
title	;CRYSTAL STRUCTURE OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H AT 1.9 ANGSTROMS RESOLUTION: ACTIVE SITE GEOMETRY AND SUBSTRATE RECOGNITION ;
keywords	HYDROLASE (GLUCOSIDASE); HYDROLASE (GLUCOSIDASE)
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	19.37 Å
rg_electron	17.97 Å
i0	14823900.00
molecular_weight	28479.0 kDa
excluded_volume	35364 Å³
envelope_volume	39498 Å³
shell_volume	18409 Å³
envelope_diameter	63.4 Å
shell_rg	24.16 Å
envelope_rg	18.17 Å
shape_rg	17.94 Å
total_rg	18.91 Å
total_atoms	2015
n_residues	265
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	62.4 Å
rg_real	19.28 Å
rg_real_error	0.42 Å
i0_real	1.4820e+07
i0_real_error	1.9550e+05
rg_reciprocal	19.29 Å
i0_reciprocal	14820000.0000
total_estimate	0.8166
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	24.6 Å
skewness	0.200
kurtosis	-0.405
angular_range	— – 0.4100 Å⁻¹
current_alpha	0.0000
highest_alpha	2883000.0000
n_real_points	72
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.871; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.000

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	85.070 Å
length_b	85.070 Å
length_c	89.150 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 43 21 2
int_tables_number	96
crystal_system	—

resolution	1.900 Å
resolution_low	10.000 Å
r_factor	0.1990
r_work	0.1990
r_free	—

description	ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H, ENDO H
formula_weight	29058.0 kDa
ec_number	3.2.1.96
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	2178

;CRYSTAL STRUCTURE OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H AT 1.9 ANGSTROMS RESOLUTION: ACTIVE SITE GEOMETRY AND SUBSTRATE RECOGNITION ;

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	163

fit	/app/data/saxs_computation/ed/1edt/1edt.fit
pddf	/app/data/pr_computation/ed/1edt/1edt.pr.out
profile	/app/data/saxs_computation/ed/1edt/1edt.dat

organism	Streptomyces plicatus
ncbi_taxonomy_id	1922