1kmb

SELECTIN-LIKE MUTANT OF MANNOSE-BINDING PROTEIN A

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

MANNOSE-BINDING PROTEIN-A

Rattus norvegicus

UniProt P19999

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 3 CALCIUM ION × 9 CHLORIDE ION × 3 water × 3 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 MBL1_RAT
Isoform —
PDB实体 1
链与序列区间 作者链 1; PDB构建体 1–149; UniProt 90–238 作者链 2; PDB构建体 1–149; UniProt 90–238 作者链 3; PDB构建体 1–149; UniProt 90–238

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1kmb
沉积日期 deposition_date1996-11-07
结构标题 titleSELECTIN-LIKE MUTANT OF MANNOSE-BINDING PROTEIN A
关键词 keywordsLECTIN; LECTIN
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1kmb__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1kmb__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1kmb__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)27.02 Å
Rg(电子密度)26.02 Å
总 Rg26.82 Å
原子数3489
残基数447
排除体积62495 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1kmb__assembly_1__model_1 trimeric (3) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (4)

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6. 折叠分类 (SCOP + CATH) 9 domains

SCOP 2.08 (6 domains)

结构域编号 domain_idd1kmb11
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.169 — C-type lectin-like
超家族 Superfamily superfamilyd.169.1 — C-type lectin-like
家族 Family familyd.169.1.1 — C-type lectin domain
结构域编号 domain_idd1kmb12
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.1 — Triple coiled coil domain of C-type lectins
家族 Family familyh.1.1.1 — Triple coiled coil domain of C-type lectins
结构域编号 domain_idd1kmb21
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.169 — C-type lectin-like
超家族 Superfamily superfamilyd.169.1 — C-type lectin-like
家族 Family familyd.169.1.1 — C-type lectin domain
结构域编号 domain_idd1kmb22
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.1 — Triple coiled coil domain of C-type lectins
家族 Family familyh.1.1.1 — Triple coiled coil domain of C-type lectins
结构域编号 domain_idd1kmb31
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.169 — C-type lectin-like
超家族 Superfamily superfamilyd.169.1 — C-type lectin-like
家族 Family familyd.169.1.1 — C-type lectin domain
结构域编号 domain_idd1kmb32
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.1 — Triple coiled coil domain of C-type lectins
家族 Family familyh.1.1.1 — Triple coiled coil domain of C-type lectins

CATH v4.4 (3 domains)

结构域编号 domain_id1kmb100
类 Class class3 — Alpha Beta
架构 Architecture architecture10 — Roll
拓扑 Topology topology100 — Mannose-Binding Protein A; Chain A
同源超家族 H-superfamily homologous superfamily10 — Mannose-Binding Protein A, subunit A
结构域编号 domain_id1kmb200
类 Class class3 — Alpha Beta
架构 Architecture architecture10 — Roll
拓扑 Topology topology100 — Mannose-Binding Protein A; Chain A
同源超家族 H-superfamily homologous superfamily10 — Mannose-Binding Protein A, subunit A
结构域编号 domain_id1kmb300
类 Class class3 — Alpha Beta
架构 Architecture architecture10 — Roll
拓扑 Topology topology100 — Mannose-Binding Protein A; Chain A
同源超家族 H-superfamily homologous superfamily10 — Mannose-Binding Protein A, subunit A
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7. 引用文献 (3)