1mnf

Domain motions in GroEL upon binding of an oligopeptide

Method: X-RAY DIFFRACTION

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1. 蛋白身份与相关结构 Protein Identity & Related Structures

groEL protein

Escherichia coli

当前结构中的状态

Assembly	物理组成	蛋白状态	分子拷贝数	共同组分	数据核对
1	蛋白异源复合物	异源复合物	蛋白 28	12-residue peptide substrate × 14 water × 14	与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据

UniProt名称	CH60_ECOLI
Isoform	—
PDB实体	1
链与序列区间	作者链 A； PDB构建体 1–547； UniProt 1–547 作者链 B； PDB构建体 1–547； UniProt 1–547 作者链 C； PDB构建体 1–547； UniProt 1–547 作者链 D； PDB构建体 1–547； UniProt 1–547 作者链 E； PDB构建体 1–547； UniProt 1–547 作者链 F； PDB构建体 1–547； UniProt 1–547 作者链 G； PDB构建体 1–547； UniProt 1–547 作者链 H； PDB构建体 1–547； UniProt 1–547 作者链 I； PDB构建体 1–547； UniProt 1–547 作者链 J； PDB构建体 1–547； UniProt 1–547 作者链 K； PDB构建体 1–547； UniProt 1–547 作者链 L； PDB构建体 1–547； UniProt 1–547 作者链 M； PDB构建体 1–547； UniProt 1–547 作者链 N； PDB构建体 1–547； UniProt 1–547

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id	1mnf
沉积日期 deposition_date	2002-09-05
结构标题 title	Domain motions in GroEL upon binding of an oligopeptide
关键词 keywords	GROEL, FORCED UNFOLDING, DOMAIN MOTIONS, OPPOSITE ALLOSTERIC, CHAPERONE; CHAPERONE
实验方法 method	X-RAY DIFFRACTION

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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1mnf__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1mnf__assembly_1__model_1 | I(q)

100 个绘图点；横轴和纵轴均采用对数尺度。

1mnf__assembly_1__model_1 | P(r) · Pending

P(r) 将按相同 assembly/model 分别计算和展示。

Rg（Guinier）	64.49 Å
Rg（电子密度）	63.33 Å
总 Rg	63.44 Å
原子数	55552
残基数	7518
排除体积	995390 Å³
最大 q	0.500 Å⁻¹

Assembly	Model	结构单元	聚集说明	状态	CRYSOL	操作
1	1	`1mnf__assembly_1__model_1`	28-meric （28）	成功	4.1.3-1-20251215 (887e7ef)	查看下载

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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (3)

实体 1 Entity 1 polymer

描述 description	groEL protein
分子量 formula_weight	57260.5 kDa
来源方法 src_method	man
拷贝数 entity_count	14

聚合物 Polymer

聚合物类型 type	polypeptide(L)
链编号 strand_id	A,B,C,D,E,F,G,H,I,J,K,L,M,N
原子数 atom_count	55765

AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM

来源 Source

来源生物 organism	Escherichia coli
NCBI 分类编号 ncbi_taxonomy_id	562
宿主生物 host_organism	Escherichia coli

实体 2 Entity 2 polymer

描述 description	12-residue peptide substrate
分子量 formula_weight	1460.7 kDa
来源方法 src_method	syn
拷贝数 entity_count	14

聚合物 Polymer

聚合物类型 type	polypeptide(L)
链编号 strand_id	O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2

SWMTTPWGFLHP

实体 3 Entity 3 water

描述 description	water
分子量 formula_weight	18.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	213

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6. 折叠分类 (SCOP + CATH) 84 domains

SCOP 2.08 (42 domains)

结构域编号 domain_id	d1mnfa1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfa2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfa3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfb1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfb2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfb3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfc1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfc2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfc3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfd1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfd2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfd3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfe1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfe2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfe3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnff1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnff2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnff3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfg1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfg2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfg3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfh1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfh2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfh3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfi1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfi2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfi3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfj1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfj2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfj3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfk1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfk2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfk3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfl1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfl2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfl3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfm1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfm2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfm3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

结构域编号 domain_id	d1mnfn1
类 Class class	a — All alpha proteins
折叠类型 Fold fold	a.129 — GroEL equatorial domain-like
超家族 Superfamily superfamily	a.129.1 — GroEL equatorial domain-like
家族 Family family	a.129.1.1 — GroEL chaperone, ATPase domain

结构域编号 domain_id	d1mnfn2
类 Class class	c — Alpha and beta proteins (a/b)
折叠类型 Fold fold	c.8 — The 'swivelling' beta/beta/alpha domain
超家族 Superfamily superfamily	c.8.5 — GroEL apical domain-like
家族 Family family	c.8.5.1 — GroEL-like chaperone, apical domain

结构域编号 domain_id	d1mnfn3
类 Class class	d — Alpha and beta proteins (a+b)
折叠类型 Fold fold	d.56 — GroEL-intermediate domain like
超家族 Superfamily superfamily	d.56.1 — GroEL-intermediate domain like
家族 Family family	d.56.1.1 — GroEL-like chaperone, intermediate domain

CATH v4.4 (42 domains)

结构域编号 domain_id	1mnfA01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfA02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfA03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfB01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfB02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfB03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfC01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfC02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfC03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfD01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfD02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfD03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfE01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfE02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfE03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfF01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfF02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfF03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfG01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfG02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfG03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfH01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfH02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfH03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfI01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfI02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfI03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfJ01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfJ02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfJ03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfK01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfK02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfK03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfL01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfL02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfL03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfM01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfM02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfM03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

结构域编号 domain_id	1mnfN01
类 Class class	1 — Mainly Alpha
架构 Architecture architecture	10 — Orthogonal Bundle
拓扑 Topology topology	560 — GROEL; domain 1
同源超家族 H-superfamily homologous superfamily	10 — GroEL-like equatorial domain

结构域编号 domain_id	1mnfN02
类 Class class	3 — Alpha Beta
架构 Architecture architecture	30 — 2-Layer Sandwich
拓扑 Topology topology	260 — GROEL; domain 2
同源超家族 H-superfamily homologous superfamily	10 — TCP-1-like chaperonin intermediate domain

结构域编号 domain_id	1mnfN03
类 Class class	3 — Alpha Beta
架构 Architecture architecture	50 — 3-Layer(bba) Sandwich
拓扑 Topology topology	7 — GroEL
同源超家族 H-superfamily homologous superfamily	10 — GroEL

▶

晶胞边长 a length_a	135.415 Å
晶胞边长 b length_b	260.694 Å
晶胞边长 c length_c	148.691 Å
晶胞夹角 α angle_alpha	90.00 °
晶胞夹角 β angle_beta	100.94 °
晶胞夹角 γ angle_gamma	90.00 °
晶胞分子数 Z z_pdb	28

空间群 space_group	P 1 21 1
空间群编号 int_tables_number	4
晶系 crystal_system	—

分辨率 resolution	3.000 Å
最低分辨率 resolution_low	20.010 Å
R 因子 r_factor	0.2360
R_work r_work	0.2360
R_free r_free	0.2590

Domain motions in GroEL upon binding of an oligopeptide

1. 蛋白身份与相关结构 Protein Identity & Related Structures

groEL protein

当前结构中的状态

数据库中的同蛋白其他状态

2. 结构基本信息 2. Structure Basics

3. Official assembly/model 理论 SAXS Official SAXS Profiles

1mnf__assembly_1__model_1

1mnf__assembly_1__model_1 | I(q)

1mnf__assembly_1__model_1 | P(r) · Pending

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

精修参数 Refinement

5. 实体与聚合物信息 Entities & Polymers (3)

实体 1 Entity 1 polymer

聚合物 Polymer

来源 Source

实体 2 Entity 2 polymer

聚合物 Polymer

实体 3 Entity 3 water

6. 折叠分类 (SCOP + CATH) 84 domains

SCOP 2.08 (42 domains)

CATH v4.4 (42 domains)

7. 引用文献 (6)

Domain motions in GroEL upon binding of an oligopeptide

1. 蛋白身份与相关结构 Protein Identity & Related Structures

groEL protein

当前结构中的状态

数据库中的同蛋白其他状态

单体

同源二聚体

同源四聚体

其他同源多聚体

异源或核酸复合物

2. 结构基本信息 2. Structure Basics

3. Official assembly/model 理论 SAXS Official SAXS Profiles

1mnf__assembly_1__model_1

1mnf__assembly_1__model_1 | I(q)

1mnf__assembly_1__model_1 | P(r) · Pending

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

精修参数 Refinement

5. 实体与聚合物信息 Entities & Polymers (3)

实体 1 Entity 1 polymer

聚合物 Polymer

来源 Source

实体 2 Entity 2 polymer

聚合物 Polymer

实体 3 Entity 3 water

6. 折叠分类 (SCOP + CATH) 84 domains

SCOP 2.08 (42 domains)

CATH v4.4 (42 domains)

7. 引用文献 (6)