Homo sapiens
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 | 异源复合物 | 蛋白 2 | Ubiquitin aldehyde × 1 （P62988） water × 2 | 与蛋白数一致 |
| 2 | 蛋白异源复合物 | 异源复合物 | 蛋白 2 | Ubiquitin aldehyde × 1 （P62988） water × 2 | 与蛋白数一致 |
| 3 | 蛋白单体 | 单体 | 蛋白 1 | water × 1 | 与蛋白数一致 |
| UniProt名称 | UBP7_HUMAN |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–353； UniProt 208–560 作者链 B； PDB构建体 1–353； UniProt 208–560 作者链 E； PDB构建体 1–353； UniProt 208–560 |
Homo sapiens
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 | 异源复合物 | 蛋白 2 | Ubiquitin carboxyl-terminal hydrolase 7 × 1 （Q93009） water × 2 | 与蛋白数一致 |
| 2 | 蛋白异源复合物 | 异源复合物 | 蛋白 2 | Ubiquitin carboxyl-terminal hydrolase 7 × 1 （Q93009） water × 2 | 与蛋白数一致 |
| UniProt名称 | UBIQ_HUMAN |
| Isoform | — |
| PDB实体 | 2 |
| 链与序列区间 | 作者链 C； PDB构建体 1–76； UniProt 1–76 作者链 D； PDB构建体 1–76； UniProt 1–76 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 1nbf |
| 沉积日期 deposition_date | 2002-12-02 |
| 结构标题 title | Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde |
| 关键词 keywords | deubiquitinating enzyme, HAUSP, Ubiquitin binding, catalytic mechanisms of UPBs, HYDROLASE; HYDROLASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 23.50 Å |
| Rg（电子密度） | 22.14 Å |
| 总 Rg | 23.07 Å |
| 原子数 | 3421 |
| 残基数 | 422 |
| 排除体积 | 60771 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d1nbfa_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.3 — Cysteine proteinases |
| 超家族 Superfamily superfamily | d.3.1 — Cysteine proteinases |
| 家族 Family family | d.3.1.9 — Ubiquitin carboxyl-terminal hydrolase, UCH |
| 结构域编号 domain_id | d1nbfb_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.3 — Cysteine proteinases |
| 超家族 Superfamily superfamily | d.3.1 — Cysteine proteinases |
| 家族 Family family | d.3.1.9 — Ubiquitin carboxyl-terminal hydrolase, UCH |
| 结构域编号 domain_id | d1nbfc_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.1 — Ubiquitin-like |
| 家族 Family family | d.15.1.1 — Ubiquitin-related |
| 结构域编号 domain_id | d1nbfd_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.1 — Ubiquitin-like |
| 家族 Family family | d.15.1.1 — Ubiquitin-related |
| 结构域编号 domain_id | d1nbfe_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.3 — Cysteine proteinases |
| 超家族 Superfamily superfamily | d.3.1 — Cysteine proteinases |
| 家族 Family family | d.3.1.9 — Ubiquitin carboxyl-terminal hydrolase, UCH |
| 结构域编号 domain_id | 1nbfA02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 210 — ubp-family deubiquitinating enzyme fold |
| 同源超家族 H-superfamily homologous superfamily | 10 — ubp-family deubiquitinating enzyme superfamily |
| 结构域编号 domain_id | 1nbfB02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 210 — ubp-family deubiquitinating enzyme fold |
| 同源超家族 H-superfamily homologous superfamily | 10 — ubp-family deubiquitinating enzyme superfamily |
| 结构域编号 domain_id | 1nbfC00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 20 — Ubiquitin-like (UB roll) |
| 同源超家族 H-superfamily homologous superfamily | 90 — Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 |
| 结构域编号 domain_id | 1nbfD00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 20 — Ubiquitin-like (UB roll) |
| 同源超家族 H-superfamily homologous superfamily | 90 — Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 |
| 结构域编号 domain_id | 1nbfE02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 210 — ubp-family deubiquitinating enzyme fold |
| 同源超家族 H-superfamily homologous superfamily | 10 — ubp-family deubiquitinating enzyme superfamily |