1xfw

Crystal structure of anthrax edema factor (EF) in complex with calmodulin and 3'5' cyclic AMP (cAMP)

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Calmodulin-sensitive adenylate cyclase

Bacillus anthracis

UniProt P40136

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Calmodulin 2 × 1 (P62158) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 Calmodulin 2 × 1 (P62158) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 2 Calmodulin 2 × 1 (P62158) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 2 Calmodulin 2 × 1 (P62158) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 2 Calmodulin 2 × 1 (P62158) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
6 Protein heterocomplex Heteromer Protein 2 Calmodulin 2 × 1 (P62158) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
7 Protein heterocomplex Heteromer Protein 4 Calmodulin 2 × 2 (P62158) MAGNESIUM ION × 2 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 2 CALCIUM ION × 6 water × 2 Consistent with protein count
8 Protein heterocomplex Heteromer Protein 4 Calmodulin 2 × 2 (P62158) MAGNESIUM ION × 2 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 2 CALCIUM ION × 6 water × 2 Consistent with protein count
9 Protein heterocomplex Heteromer Protein 4 Calmodulin 2 × 2 (P62158) MAGNESIUM ION × 2 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 2 CALCIUM ION × 6 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CYAA_BACAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 10–777; UniProt 33–800 Author chain B; PDBConstruct 10–777; UniProt 33–800 Author chain C; PDBConstruct 10–777; UniProt 33–800 Author chain D; PDBConstruct 10–777; UniProt 33–800 Author chain E; PDBConstruct 10–777; UniProt 33–800 Author chain F; PDBConstruct 10–777; UniProt 33–800

Calmodulin 2

Homo sapiens

UniProt P62158

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Calmodulin-sensitive adenylate cyclase × 1 (P40136) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 Calmodulin-sensitive adenylate cyclase × 1 (P40136) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 2 Calmodulin-sensitive adenylate cyclase × 1 (P40136) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 2 Calmodulin-sensitive adenylate cyclase × 1 (P40136) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 2 Calmodulin-sensitive adenylate cyclase × 1 (P40136) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
6 Protein heterocomplex Heteromer Protein 2 Calmodulin-sensitive adenylate cyclase × 1 (P40136) MAGNESIUM ION × 1 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 1 CALCIUM ION × 3 water × 1 Consistent with protein count
7 Protein heterocomplex Heteromer Protein 4 Calmodulin-sensitive adenylate cyclase × 2 (P40136) MAGNESIUM ION × 2 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 2 CALCIUM ION × 6 water × 2 Consistent with protein count
8 Protein heterocomplex Heteromer Protein 4 Calmodulin-sensitive adenylate cyclase × 2 (P40136) MAGNESIUM ION × 2 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 2 CALCIUM ION × 6 water × 2 Consistent with protein count
9 Protein heterocomplex Heteromer Protein 4 Calmodulin-sensitive adenylate cyclase × 2 (P40136) MAGNESIUM ION × 2 ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE × 2 CALCIUM ION × 6 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CALM_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain O; PDBConstruct 1–149; UniProt 1–149 Author chain P; PDBConstruct 1–149; UniProt 1–149 Author chain Q; PDBConstruct 1–149; UniProt 1–149 Author chain R; PDBConstruct 1–149; UniProt 1–149 Author chain S; PDBConstruct 1–149; UniProt 1–149 Author chain T; PDBConstruct 1–149; UniProt 1–149

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1xfw
Deposition date deposition_date2004-09-15
Structure title titleCrystal structure of anthrax edema factor (EF) in complex with calmodulin and 3'5' cyclic AMP (cAMP)
Keywords keywordsprotein-protein interaction, LYASE-METAL BINDING PROTEIN COMPLEX; LYASE/METAL BINDING PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1xfw__assembly_7__model_1

Assembly 7 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1xfw__assembly_7__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1xfw__assembly_7__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)45.14 Å
Rg (electron density)44.81 Å
Total Rg44.98 Å
Atom count14328
Residues1762
Excluded volume255330 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1xfw__assembly_1__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 1xfw__assembly_2__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
3 1 1xfw__assembly_3__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
4 1 1xfw__assembly_4__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
5 1 1xfw__assembly_5__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
6 1 1xfw__assembly_6__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
7 1 1xfw__assembly_7__model_1 tetrameric (4) Success 4.1.3-1-20251215 (887e7ef) View Download
8 1 1xfw__assembly_8__model_1 tetrameric (4) Success 4.1.3-1-20251215 (887e7ef) View Download
9 1 1xfw__assembly_9__model_1 tetrameric (4) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (6)

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6. Fold Classification (SCOP + CATH) 36 domains

SCOP 2.08 (6 domains)

Domain ID domain_idd1xfwo1
Class classa — All alpha proteins
Fold Fold folda.39 — EF Hand-like
Superfamily Superfamily superfamilya.39.1 — EF-hand
Family Family familya.39.1.5 — Calmodulin-like
Domain ID domain_idd1xfwp1
Class classa — All alpha proteins
Fold Fold folda.39 — EF Hand-like
Superfamily Superfamily superfamilya.39.1 — EF-hand
Family Family familya.39.1.5 — Calmodulin-like
Domain ID domain_idd1xfwq1
Class classa — All alpha proteins
Fold Fold folda.39 — EF Hand-like
Superfamily Superfamily superfamilya.39.1 — EF-hand
Family Family familya.39.1.5 — Calmodulin-like
Domain ID domain_idd1xfwr1
Class classa — All alpha proteins
Fold Fold folda.39 — EF Hand-like
Superfamily Superfamily superfamilya.39.1 — EF-hand
Family Family familya.39.1.5 — Calmodulin-like
Domain ID domain_idd1xfws1
Class classa — All alpha proteins
Fold Fold folda.39 — EF Hand-like
Superfamily Superfamily superfamilya.39.1 — EF-hand
Family Family familya.39.1.5 — Calmodulin-like
Domain ID domain_idd1xfwt1
Class classa — All alpha proteins
Fold Fold folda.39 — EF Hand-like
Superfamily Superfamily superfamilya.39.1 — EF-hand
Family Family familya.39.1.5 — Calmodulin-like

CATH v4.4 (30 domains)

Domain ID domain_id1xfwA01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology390 — Collagenase (Catalytic Domain)
Homologous superfamily homologous superfamily10 — Collagenase (Catalytic Domain)
Domain ID domain_id1xfwA03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology1760 — Adenylylcyclase toxin fold
Homologous superfamily homologous superfamily10 — Anthrax toxin, edema factor, central domain
Domain ID domain_id1xfwA04
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology140 — Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1xfwB01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology390 — Collagenase (Catalytic Domain)
Homologous superfamily homologous superfamily10 — Collagenase (Catalytic Domain)
Domain ID domain_id1xfwB03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology1760 — Adenylylcyclase toxin fold
Homologous superfamily homologous superfamily10 — Anthrax toxin, edema factor, central domain
Domain ID domain_id1xfwB04
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology140 — Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1xfwC01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology390 — Collagenase (Catalytic Domain)
Homologous superfamily homologous superfamily10 — Collagenase (Catalytic Domain)
Domain ID domain_id1xfwC03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology1760 — Adenylylcyclase toxin fold
Homologous superfamily homologous superfamily10 — Anthrax toxin, edema factor, central domain
Domain ID domain_id1xfwC04
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology140 — Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1xfwD01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology390 — Collagenase (Catalytic Domain)
Homologous superfamily homologous superfamily10 — Collagenase (Catalytic Domain)
Domain ID domain_id1xfwD03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology1760 — Adenylylcyclase toxin fold
Homologous superfamily homologous superfamily10 — Anthrax toxin, edema factor, central domain
Domain ID domain_id1xfwD04
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology140 — Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1xfwE01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology390 — Collagenase (Catalytic Domain)
Homologous superfamily homologous superfamily10 — Collagenase (Catalytic Domain)
Domain ID domain_id1xfwE03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology1760 — Adenylylcyclase toxin fold
Homologous superfamily homologous superfamily10 — Anthrax toxin, edema factor, central domain
Domain ID domain_id1xfwE04
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology140 — Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1xfwF01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology390 — Collagenase (Catalytic Domain)
Homologous superfamily homologous superfamily10 — Collagenase (Catalytic Domain)
Domain ID domain_id1xfwF03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology1760 — Adenylylcyclase toxin fold
Homologous superfamily homologous superfamily10 — Anthrax toxin, edema factor, central domain
Domain ID domain_id1xfwF04
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology140 — Butyryl-CoA Dehydrogenase, subunit A; domain 3
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1xfwO01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwO02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwP01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwP02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwQ01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwQ02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwR01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwR02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwS01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwS02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwT01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
Domain ID domain_id1xfwT02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology238 — Recoverin; domain 1
Homologous superfamily homologous superfamily10 — EF-hand
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7. Citations (1)