2ex3
Bacteriophage phi29 DNA polymerase bound to terminal protein
SAXS 散射曲线 SAXS Profile
P(r) 距离分布 P(r) Distribution
1. 结构基本信息 1. Structure Basics
| 条目编号 entry_id | 2ex3 |
| 沉积日期 deposition_date | 2005-11-07 |
| 结构标题 title | Bacteriophage phi29 DNA polymerase bound to terminal protein |
| 关键词 keywords | DNA POLYMERASE: PROTEIN PRIMER COMPLEX, transferase-replication COMPLEX; transferase/replication |
| 实验方法 method | X-RAY DIFFRACTION |
2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)
| 回转半径 Rg (Guinier) rg_guinier | 72.29 Å |
| 回转半径 Rg (电子) rg_electron | 72.48 Å |
| 零角强度 I(0) i0 | 3694740000.00 |
| 分子量 molecular_weight | 528670.0 kDa |
| 排除体积 excluded_volume | 665720 ų |
| 包络体积 envelope_volume | 1092500 ų |
| 水化壳体积 shell_volume | 128610 ų |
| 包络直径 envelope_diameter | 253.2 Å |
| 壳层 Rg shell_rg | 67.83 Å |
| 包络 Rg envelope_rg | 70.13 Å |
| 形状 Rg shape_rg | 72.44 Å |
| 总 Rg total_rg | 72.53 Å |
| 总原子数 total_atoms | 37108 |
| 残基数 n_residues | 4596 |
| 球谐函数阶数 n_harmonics | 20 |
| q 范围 q_range | — – 0.5000 Å−1 |
| 数据点数 n_points | 101 |
| 壳层类型 shell_type | directional |
| 溶剂电子密度 solvent_density | 0.3340 e/ų |
| 壳层衬度 contrast_shell | 0.0300 e/ų |
| CRYSOL 版本 crysol_version | 4.1.3 |
3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)
| 最大尺寸 Dmax dmax | 212.4 Å |
| Rg (实空间) rg_real | 72.19 Å |
| Rg 误差 (实空间) rg_real_error | 0.94 Å |
| I(0) (实空间) i0_real | 3.6820e+09 |
| I(0) 误差 (实空间) i0_real_error | 6.5570e+07 |
| Rg (倒空间) rg_reciprocal | 71.44 Å |
| I(0) (倒空间) i0_reciprocal | 3687000000.0000 |
| 解质量估计 total_estimate | 0.8403 |
| 解质量评级 solution_quality | GOOD a GOOD solution |
| P(r) 峰数 n_peaks | 1 |
| 主峰位置 r_peak_primary | 77.2 Å |
| 偏度 Skewness skewness | 0.339 |
| 峰度 Kurtosis kurtosis | -0.636 |
| 角度范围 angular_range | — – 0.1100 Å−1 |
| 当前正则化参数 α current_alpha | 0.1267 |
| 最高正则化参数 α highest_alpha | 158900000.0000 |
| 实空间数据点数 n_real_points | 23 |
| GNOM 版本 gnom_version | 4.1.3 |
| 质量判据 quality_criteria | AN1: 0.000; Oscil: 0.980; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.974; Smooth: 0.001 |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合体信息 (3)
6. 折叠分类 (SCOP + CATH) 66 domains
SCOP 2.08 (18 domains)
| 结构域编号 domain_id | d2ex3a1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.5 — DnaQ-like 3'-5' exonuclease |
| 结构域编号 domain_id | d2ex3a2 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.8 — DNA/RNA polymerases |
| 超家族 Superfamily superfamily | e.8.1 — DNA/RNA polymerases |
| 家族 Family family | e.8.1.1 — DNA polymerase I |
| 结构域编号 domain_id | d2ex3b1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.263 — DNA terminal protein |
| 超家族 Superfamily superfamily | a.263.1 — DNA terminal protein |
| 家族 Family family | a.263.1.1 — DNA terminal protein |
| 结构域编号 domain_id | d2ex3c1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.5 — DnaQ-like 3'-5' exonuclease |
| 结构域编号 domain_id | d2ex3c2 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.8 — DNA/RNA polymerases |
| 超家族 Superfamily superfamily | e.8.1 — DNA/RNA polymerases |
| 家族 Family family | e.8.1.1 — DNA polymerase I |
| 结构域编号 domain_id | d2ex3d1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.263 — DNA terminal protein |
| 超家族 Superfamily superfamily | a.263.1 — DNA terminal protein |
| 家族 Family family | a.263.1.1 — DNA terminal protein |
| 结构域编号 domain_id | d2ex3e1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.5 — DnaQ-like 3'-5' exonuclease |
| 结构域编号 domain_id | d2ex3e2 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.8 — DNA/RNA polymerases |
| 超家族 Superfamily superfamily | e.8.1 — DNA/RNA polymerases |
| 家族 Family family | e.8.1.1 — DNA polymerase I |
| 结构域编号 domain_id | d2ex3f1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.263 — DNA terminal protein |
| 超家族 Superfamily superfamily | a.263.1 — DNA terminal protein |
| 家族 Family family | a.263.1.1 — DNA terminal protein |
| 结构域编号 domain_id | d2ex3g1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.5 — DnaQ-like 3'-5' exonuclease |
| 结构域编号 domain_id | d2ex3g2 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.8 — DNA/RNA polymerases |
| 超家族 Superfamily superfamily | e.8.1 — DNA/RNA polymerases |
| 家族 Family family | e.8.1.1 — DNA polymerase I |
| 结构域编号 domain_id | d2ex3h1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.263 — DNA terminal protein |
| 超家族 Superfamily superfamily | a.263.1 — DNA terminal protein |
| 家族 Family family | a.263.1.1 — DNA terminal protein |
| 结构域编号 domain_id | d2ex3i1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.5 — DnaQ-like 3'-5' exonuclease |
| 结构域编号 domain_id | d2ex3i2 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.8 — DNA/RNA polymerases |
| 超家族 Superfamily superfamily | e.8.1 — DNA/RNA polymerases |
| 家族 Family family | e.8.1.1 — DNA polymerase I |
| 结构域编号 domain_id | d2ex3j1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.263 — DNA terminal protein |
| 超家族 Superfamily superfamily | a.263.1 — DNA terminal protein |
| 家族 Family family | a.263.1.1 — DNA terminal protein |
| 结构域编号 domain_id | d2ex3k1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.5 — DnaQ-like 3'-5' exonuclease |
| 结构域编号 domain_id | d2ex3k2 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.8 — DNA/RNA polymerases |
| 超家族 Superfamily superfamily | e.8.1 — DNA/RNA polymerases |
| 家族 Family family | e.8.1.1 — DNA polymerase I |
| 结构域编号 domain_id | d2ex3l1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.263 — DNA terminal protein |
| 超家族 Superfamily superfamily | a.263.1 — DNA terminal protein |
| 家族 Family family | a.263.1.1 — DNA terminal protein |
CATH v4.4 (48 domains)
| 结构域编号 domain_id | 2ex3A01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 2ex3A02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1600 — Palm domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — B family DNA polymerase, palm domain |
| 结构域编号 domain_id | 2ex3A03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1770 — TPR 1 domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — TPR 1 domain of DNA polymerase |
| 结构域编号 domain_id | 2ex3A04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 690 — B family DNA polymerase, finger domain |
| 结构域编号 domain_id | 2ex3A05 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 20 — DNA polymerase; domain 5 |
| 结构域编号 domain_id | 2ex3A06 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — DNA polymerase; domain 6 |
| 结构域编号 domain_id | 2ex3B01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 960 — |
| 结构域编号 domain_id | 2ex3B02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1270 — Substrate Binding Domain Of Dnak; Chain:A; Domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 230 — DNA terminal protein Gp3, priming domain |
| 结构域编号 domain_id | 2ex3C01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 2ex3C02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1600 — Palm domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — B family DNA polymerase, palm domain |
| 结构域编号 domain_id | 2ex3C03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1770 — TPR 1 domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — TPR 1 domain of DNA polymerase |
| 结构域编号 domain_id | 2ex3C04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 690 — B family DNA polymerase, finger domain |
| 结构域编号 domain_id | 2ex3C05 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 20 — DNA polymerase; domain 5 |
| 结构域编号 domain_id | 2ex3C06 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — DNA polymerase; domain 6 |
| 结构域编号 domain_id | 2ex3D01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 960 — |
| 结构域编号 domain_id | 2ex3D02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1270 — Substrate Binding Domain Of Dnak; Chain:A; Domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 230 — DNA terminal protein Gp3, priming domain |
| 结构域编号 domain_id | 2ex3E01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 2ex3E02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1600 — Palm domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — B family DNA polymerase, palm domain |
| 结构域编号 domain_id | 2ex3E03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1770 — TPR 1 domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — TPR 1 domain of DNA polymerase |
| 结构域编号 domain_id | 2ex3E04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 690 — B family DNA polymerase, finger domain |
| 结构域编号 domain_id | 2ex3E05 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 20 — DNA polymerase; domain 5 |
| 结构域编号 domain_id | 2ex3E06 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — DNA polymerase; domain 6 |
| 结构域编号 domain_id | 2ex3F01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 960 — |
| 结构域编号 domain_id | 2ex3F02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1270 — Substrate Binding Domain Of Dnak; Chain:A; Domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 230 — DNA terminal protein Gp3, priming domain |
| 结构域编号 domain_id | 2ex3G01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 2ex3G02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1600 — Palm domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — B family DNA polymerase, palm domain |
| 结构域编号 domain_id | 2ex3G03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1770 — TPR 1 domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — TPR 1 domain of DNA polymerase |
| 结构域编号 domain_id | 2ex3G04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 690 — B family DNA polymerase, finger domain |
| 结构域编号 domain_id | 2ex3G05 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 20 — DNA polymerase; domain 5 |
| 结构域编号 domain_id | 2ex3G06 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — DNA polymerase; domain 6 |
| 结构域编号 domain_id | 2ex3H01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 960 — |
| 结构域编号 domain_id | 2ex3H02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1270 — Substrate Binding Domain Of Dnak; Chain:A; Domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 230 — DNA terminal protein Gp3, priming domain |
| 结构域编号 domain_id | 2ex3I01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 2ex3I02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1600 — Palm domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — B family DNA polymerase, palm domain |
| 结构域编号 domain_id | 2ex3I03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1770 — TPR 1 domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — TPR 1 domain of DNA polymerase |
| 结构域编号 domain_id | 2ex3I04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 690 — B family DNA polymerase, finger domain |
| 结构域编号 domain_id | 2ex3I05 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 20 — DNA polymerase; domain 5 |
| 结构域编号 domain_id | 2ex3I06 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — DNA polymerase; domain 6 |
| 结构域编号 domain_id | 2ex3J01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 960 — |
| 结构域编号 domain_id | 2ex3J02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1270 — Substrate Binding Domain Of Dnak; Chain:A; Domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 230 — DNA terminal protein Gp3, priming domain |
| 结构域编号 domain_id | 2ex3K01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 2ex3K02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1600 — Palm domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — B family DNA polymerase, palm domain |
| 结构域编号 domain_id | 2ex3K03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1770 — TPR 1 domain of DNA polymerase |
| 同源超家族 H-superfamily homologous superfamily | 10 — TPR 1 domain of DNA polymerase |
| 结构域编号 domain_id | 2ex3K04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 690 — B family DNA polymerase, finger domain |
| 结构域编号 domain_id | 2ex3K05 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 20 — DNA polymerase; domain 5 |
| 结构域编号 domain_id | 2ex3K06 |
| 类 Class class | 4 — Few Secondary Structures |
| 架构 Architecture architecture | 10 — Irregular |
| 拓扑 Topology topology | 80 — Rhinovirus 14, subunit 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — DNA polymerase; domain 6 |
| 结构域编号 domain_id | 2ex3L01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 960 — |
| 结构域编号 domain_id | 2ex3L02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1270 — Substrate Binding Domain Of Dnak; Chain:A; Domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 230 — DNA terminal protein Gp3, priming domain |