2fug
Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
SAXS 散射曲线 SAXS Profile
P(r) 距离分布 P(r) Distribution
1. 结构基本信息 1. Structure Basics
| 条目编号 entry_id | 2fug |
| 沉积日期 deposition_date | 2006-01-26 |
| 结构标题 title | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus |
| 关键词 keywords | OXIDOREDUCTASE, ELECTRON TRANSPORT, RESPIRATORY CHAIN; OXIDOREDUCTASE |
| 实验方法 method | X-RAY DIFFRACTION |
2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)
| 回转半径 Rg (Guinier) rg_guinier | 83.55 Å |
| 回转半径 Rg (电子) rg_electron | 83.84 Å |
| 零角强度 I(0) i0 | 15343400000.00 |
| 分子量 molecular_weight | 1056700.0 kDa |
| 排除体积 excluded_volume | 1321400 ų |
| 包络体积 envelope_volume | 2008400 ų |
| 水化壳体积 shell_volume | 197520 ų |
| 包络直径 envelope_diameter | 292.0 Å |
| 壳层 Rg shell_rg | 81.95 Å |
| 包络 Rg envelope_rg | 81.41 Å |
| 形状 Rg shape_rg | 83.89 Å |
| 总 Rg total_rg | 83.63 Å |
| 总原子数 total_atoms | 73916 |
| 残基数 n_residues | 9332 |
| 球谐函数阶数 n_harmonics | 20 |
| q 范围 q_range | — – 0.5000 Å−1 |
| 数据点数 n_points | 101 |
| 壳层类型 shell_type | directional |
| 溶剂电子密度 solvent_density | 0.3340 e/ų |
| 壳层衬度 contrast_shell | 0.0300 e/ų |
| CRYSOL 版本 crysol_version | 4.1.3 |
3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)
| 最大尺寸 Dmax dmax | 288.0 Å |
| Rg (实空间) rg_real | 87.50 Å |
| Rg 误差 (实空间) rg_real_error | 1.67 Å |
| I(0) (实空间) i0_real | 1.5370e+10 |
| I(0) 误差 (实空间) i0_real_error | 3.1730e+08 |
| Rg (倒空间) rg_reciprocal | 82.91 Å |
| I(0) (倒空间) i0_reciprocal | 15310000000.0000 |
| 解质量估计 total_estimate | 0.8835 |
| 解质量评级 solution_quality | GOOD a GOOD solution |
| P(r) 峰数 n_peaks | 1 |
| 主峰位置 r_peak_primary | 90.9 Å |
| 偏度 Skewness skewness | 0.433 |
| 峰度 Kurtosis kurtosis | -0.266 |
| 角度范围 angular_range | — – 0.0950 Å−1 |
| 当前正则化参数 α current_alpha | 1.3140 |
| 最高正则化参数 α highest_alpha | 408400000.0000 |
| 实空间数据点数 n_real_points | 20 |
| GNOM 版本 gnom_version | 4.1.3 |
| 质量判据 quality_criteria | AN1: 0.000; Oscil: 0.933; Stabil: 0.859; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.132 |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合体信息 (11)
6. 折叠分类 (SCOP + CATH) 92 domains
SCOP 2.08 (52 domains)
| 结构域编号 domain_id | d2fug11 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.29 — Bromodomain-like |
| 超家族 Superfamily superfamily | a.29.12 — Nqo1C-terminal domain-like |
| 家族 Family family | a.29.12.1 — Nqo1C-terminal domain-like |
| 结构域编号 domain_id | d2fug12 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.142 — Nqo1 FMN-binding domain-like |
| 超家族 Superfamily superfamily | c.142.1 — Nqo1 FMN-binding domain-like |
| 家族 Family family | c.142.1.1 — Nqo1 FMN-binding domain-like |
| 结构域编号 domain_id | d2fug13 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.13 — Nqo1 middle domain-like |
| 家族 Family family | d.15.13.1 — Nqo1 middle domain-like |
| 结构域编号 domain_id | d2fug21 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.47 — Thioredoxin fold |
| 超家族 Superfamily superfamily | c.47.1 — Thioredoxin-like |
| 家族 Family family | c.47.1.21 — NQO2-like |
| 结构域编号 domain_id | d2fug31 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.52 — Double psi beta-barrel |
| 超家族 Superfamily superfamily | b.52.2 — ADC-like |
| 家族 Family family | b.52.2.2 — Formate dehydrogenase/DMSO reductase, C-terminal domain |
| 结构域编号 domain_id | d2fug32 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.81 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 超家族 Superfamily superfamily | c.81.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 家族 Family family | c.81.1.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 结构域编号 domain_id | d2fug33 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.4 — 2Fe-2S ferredoxin-like |
| 家族 Family family | d.15.4.2 — 2Fe-2S ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fug34 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fug41 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.18 — HydB/Nqo4-like |
| 超家族 Superfamily superfamily | e.18.1 — HydB/Nqo4-like |
| 家族 Family family | e.18.1.2 — Nqo4-like |
| 结构域编号 domain_id | d2fug51 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.307 — Nqo5-like |
| 超家族 Superfamily superfamily | d.307.1 — Nqo5-like |
| 家族 Family family | d.307.1.1 — Nqo5-like |
| 结构域编号 domain_id | d2fug61 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.19 — HydA/Nqo6-like |
| 超家族 Superfamily superfamily | e.19.1 — HydA/Nqo6-like |
| 家族 Family family | e.19.1.2 — Nq06-like |
| 结构域编号 domain_id | d2fug71 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.82 — N domain of copper amine oxidase-like |
| 超家族 Superfamily superfamily | d.82.2 — Frataxin/Nqo15-like |
| 家族 Family family | d.82.2.2 — Nqo15-like |
| 结构域编号 domain_id | d2fug91 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fuga1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.29 — Bromodomain-like |
| 超家族 Superfamily superfamily | a.29.12 — Nqo1C-terminal domain-like |
| 家族 Family family | a.29.12.1 — Nqo1C-terminal domain-like |
| 结构域编号 domain_id | d2fuga2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.142 — Nqo1 FMN-binding domain-like |
| 超家族 Superfamily superfamily | c.142.1 — Nqo1 FMN-binding domain-like |
| 家族 Family family | c.142.1.1 — Nqo1 FMN-binding domain-like |
| 结构域编号 domain_id | d2fuga3 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.13 — Nqo1 middle domain-like |
| 家族 Family family | d.15.13.1 — Nqo1 middle domain-like |
| 结构域编号 domain_id | d2fugb1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.47 — Thioredoxin fold |
| 超家族 Superfamily superfamily | c.47.1 — Thioredoxin-like |
| 家族 Family family | c.47.1.21 — NQO2-like |
| 结构域编号 domain_id | d2fugc1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.52 — Double psi beta-barrel |
| 超家族 Superfamily superfamily | b.52.2 — ADC-like |
| 家族 Family family | b.52.2.2 — Formate dehydrogenase/DMSO reductase, C-terminal domain |
| 结构域编号 domain_id | d2fugc2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.81 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 超家族 Superfamily superfamily | c.81.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 家族 Family family | c.81.1.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 结构域编号 domain_id | d2fugc3 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.4 — 2Fe-2S ferredoxin-like |
| 家族 Family family | d.15.4.2 — 2Fe-2S ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugc4 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugd1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.18 — HydB/Nqo4-like |
| 超家族 Superfamily superfamily | e.18.1 — HydB/Nqo4-like |
| 家族 Family family | e.18.1.2 — Nqo4-like |
| 结构域编号 domain_id | d2fuge1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.307 — Nqo5-like |
| 超家族 Superfamily superfamily | d.307.1 — Nqo5-like |
| 家族 Family family | d.307.1.1 — Nqo5-like |
| 结构域编号 domain_id | d2fugf1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.19 — HydA/Nqo6-like |
| 超家族 Superfamily superfamily | e.19.1 — HydA/Nqo6-like |
| 家族 Family family | e.19.1.2 — Nq06-like |
| 结构域编号 domain_id | d2fugg1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugh1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.82 — N domain of copper amine oxidase-like |
| 超家族 Superfamily superfamily | d.82.2 — Frataxin/Nqo15-like |
| 家族 Family family | d.82.2.2 — Nqo15-like |
| 结构域编号 domain_id | d2fugj1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.29 — Bromodomain-like |
| 超家族 Superfamily superfamily | a.29.12 — Nqo1C-terminal domain-like |
| 家族 Family family | a.29.12.1 — Nqo1C-terminal domain-like |
| 结构域编号 domain_id | d2fugj2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.142 — Nqo1 FMN-binding domain-like |
| 超家族 Superfamily superfamily | c.142.1 — Nqo1 FMN-binding domain-like |
| 家族 Family family | c.142.1.1 — Nqo1 FMN-binding domain-like |
| 结构域编号 domain_id | d2fugj3 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.13 — Nqo1 middle domain-like |
| 家族 Family family | d.15.13.1 — Nqo1 middle domain-like |
| 结构域编号 domain_id | d2fugk1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.47 — Thioredoxin fold |
| 超家族 Superfamily superfamily | c.47.1 — Thioredoxin-like |
| 家族 Family family | c.47.1.21 — NQO2-like |
| 结构域编号 domain_id | d2fugl1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.52 — Double psi beta-barrel |
| 超家族 Superfamily superfamily | b.52.2 — ADC-like |
| 家族 Family family | b.52.2.2 — Formate dehydrogenase/DMSO reductase, C-terminal domain |
| 结构域编号 domain_id | d2fugl2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.81 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 超家族 Superfamily superfamily | c.81.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 家族 Family family | c.81.1.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 结构域编号 domain_id | d2fugl3 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.4 — 2Fe-2S ferredoxin-like |
| 家族 Family family | d.15.4.2 — 2Fe-2S ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugl4 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugm1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.18 — HydB/Nqo4-like |
| 超家族 Superfamily superfamily | e.18.1 — HydB/Nqo4-like |
| 家族 Family family | e.18.1.2 — Nqo4-like |
| 结构域编号 domain_id | d2fugn1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.307 — Nqo5-like |
| 超家族 Superfamily superfamily | d.307.1 — Nqo5-like |
| 家族 Family family | d.307.1.1 — Nqo5-like |
| 结构域编号 domain_id | d2fugo1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.19 — HydA/Nqo6-like |
| 超家族 Superfamily superfamily | e.19.1 — HydA/Nqo6-like |
| 家族 Family family | e.19.1.2 — Nq06-like |
| 结构域编号 domain_id | d2fugp1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugq1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.82 — N domain of copper amine oxidase-like |
| 超家族 Superfamily superfamily | d.82.2 — Frataxin/Nqo15-like |
| 家族 Family family | d.82.2.2 — Nqo15-like |
| 结构域编号 domain_id | d2fugs1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.29 — Bromodomain-like |
| 超家族 Superfamily superfamily | a.29.12 — Nqo1C-terminal domain-like |
| 家族 Family family | a.29.12.1 — Nqo1C-terminal domain-like |
| 结构域编号 domain_id | d2fugs2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.142 — Nqo1 FMN-binding domain-like |
| 超家族 Superfamily superfamily | c.142.1 — Nqo1 FMN-binding domain-like |
| 家族 Family family | c.142.1.1 — Nqo1 FMN-binding domain-like |
| 结构域编号 domain_id | d2fugs3 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.13 — Nqo1 middle domain-like |
| 家族 Family family | d.15.13.1 — Nqo1 middle domain-like |
| 结构域编号 domain_id | d2fugt1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.47 — Thioredoxin fold |
| 超家族 Superfamily superfamily | c.47.1 — Thioredoxin-like |
| 家族 Family family | c.47.1.21 — NQO2-like |
| 结构域编号 domain_id | d2fugu1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.52 — Double psi beta-barrel |
| 超家族 Superfamily superfamily | b.52.2 — ADC-like |
| 家族 Family family | b.52.2.2 — Formate dehydrogenase/DMSO reductase, C-terminal domain |
| 结构域编号 domain_id | d2fugu2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.81 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 超家族 Superfamily superfamily | c.81.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 家族 Family family | c.81.1.1 — Formate dehydrogenase/DMSO reductase, domains 1-3 |
| 结构域编号 domain_id | d2fugu3 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.15 — beta-Grasp (ubiquitin-like) |
| 超家族 Superfamily superfamily | d.15.4 — 2Fe-2S ferredoxin-like |
| 家族 Family family | d.15.4.2 — 2Fe-2S ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugu4 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugv1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.18 — HydB/Nqo4-like |
| 超家族 Superfamily superfamily | e.18.1 — HydB/Nqo4-like |
| 家族 Family family | e.18.1.2 — Nqo4-like |
| 结构域编号 domain_id | d2fugw1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.307 — Nqo5-like |
| 超家族 Superfamily superfamily | d.307.1 — Nqo5-like |
| 家族 Family family | d.307.1.1 — Nqo5-like |
| 结构域编号 domain_id | d2fugx1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.19 — HydA/Nqo6-like |
| 超家族 Superfamily superfamily | e.19.1 — HydA/Nqo6-like |
| 家族 Family family | e.19.1.2 — Nq06-like |
| 结构域编号 domain_id | d2fugy1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.58 — Ferredoxin-like |
| 超家族 Superfamily superfamily | d.58.1 — 4Fe-4S ferredoxins |
| 家族 Family family | d.58.1.5 — Ferredoxin domains from multidomain proteins |
| 结构域编号 domain_id | d2fugz1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.82 — N domain of copper amine oxidase-like |
| 超家族 Superfamily superfamily | d.82.2 — Frataxin/Nqo15-like |
| 家族 Family family | d.82.2.2 — Nqo15-like |
CATH v4.4 (40 domains)
| 结构域编号 domain_id | 2fug101 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 1450 — |
| 结构域编号 domain_id | 2fug102 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 11540 — NADH-ubiquinone oxidoreductase 51kDa subunit |
| 结构域编号 domain_id | 2fug103 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 20 — Ubiquitin-like (UB roll) |
| 同源超家族 H-superfamily homologous superfamily | 600 — |
| 结构域编号 domain_id | 2fug104 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1440 — de novo design (two linked rop proteins) |
| 同源超家族 H-superfamily homologous superfamily | 230 — NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain |
| 结构域编号 domain_id | 2fug201 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 1590 — NADH-quinone oxidoreductase subunit E |
| 结构域编号 domain_id | 2fug202 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 30 — Glutaredoxin |
| 同源超家族 H-superfamily homologous superfamily | 10 — Glutaredoxin |
| 结构域编号 domain_id | 2fug400 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 645 — Cytochrome-c3 Hydrogenase; chain B |
| 同源超家族 H-superfamily homologous superfamily | 10 — Cytochrome-c3 Hydrogenase, chain B |
| 结构域编号 domain_id | 2fug600 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 12280 — |
| 结构域编号 domain_id | 2fug700 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 920 — Metal Transport, Frataxin; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 80 — NADH-quinone oxidoreductase, subunit 15 |
| 结构域编号 domain_id | 2fug900 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 70 — Alpha-Beta Plaits |
| 同源超家族 H-superfamily homologous superfamily | 3270 — |
| 结构域编号 domain_id | 2fugA01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 1450 — |
| 结构域编号 domain_id | 2fugA02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 11540 — NADH-ubiquinone oxidoreductase 51kDa subunit |
| 结构域编号 domain_id | 2fugA03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 20 — Ubiquitin-like (UB roll) |
| 同源超家族 H-superfamily homologous superfamily | 600 — |
| 结构域编号 domain_id | 2fugA04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1440 — de novo design (two linked rop proteins) |
| 同源超家族 H-superfamily homologous superfamily | 230 — NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain |
| 结构域编号 domain_id | 2fugB01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 1590 — NADH-quinone oxidoreductase subunit E |
| 结构域编号 domain_id | 2fugB02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 30 — Glutaredoxin |
| 同源超家族 H-superfamily homologous superfamily | 10 — Glutaredoxin |
| 结构域编号 domain_id | 2fugD00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 645 — Cytochrome-c3 Hydrogenase; chain B |
| 同源超家族 H-superfamily homologous superfamily | 10 — Cytochrome-c3 Hydrogenase, chain B |
| 结构域编号 domain_id | 2fugF00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 12280 — |
| 结构域编号 domain_id | 2fugG00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 70 — Alpha-Beta Plaits |
| 同源超家族 H-superfamily homologous superfamily | 3270 — |
| 结构域编号 domain_id | 2fugH00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 920 — Metal Transport, Frataxin; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 80 — NADH-quinone oxidoreductase, subunit 15 |
| 结构域编号 domain_id | 2fugJ01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 1450 — |
| 结构域编号 domain_id | 2fugJ02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 11540 — NADH-ubiquinone oxidoreductase 51kDa subunit |
| 结构域编号 domain_id | 2fugJ03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 20 — Ubiquitin-like (UB roll) |
| 同源超家族 H-superfamily homologous superfamily | 600 — |
| 结构域编号 domain_id | 2fugJ04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1440 — de novo design (two linked rop proteins) |
| 同源超家族 H-superfamily homologous superfamily | 230 — NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain |
| 结构域编号 domain_id | 2fugK01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 1590 — NADH-quinone oxidoreductase subunit E |
| 结构域编号 domain_id | 2fugK02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 30 — Glutaredoxin |
| 同源超家族 H-superfamily homologous superfamily | 10 — Glutaredoxin |
| 结构域编号 domain_id | 2fugM00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 645 — Cytochrome-c3 Hydrogenase; chain B |
| 同源超家族 H-superfamily homologous superfamily | 10 — Cytochrome-c3 Hydrogenase, chain B |
| 结构域编号 domain_id | 2fugO00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 12280 — |
| 结构域编号 domain_id | 2fugP00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 70 — Alpha-Beta Plaits |
| 同源超家族 H-superfamily homologous superfamily | 3270 — |
| 结构域编号 domain_id | 2fugQ00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 920 — Metal Transport, Frataxin; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 80 — NADH-quinone oxidoreductase, subunit 15 |
| 结构域编号 domain_id | 2fugS01 |
| 类 Class class | 6 — Special |
| 架构 Architecture architecture | 10 — Helix non-globular |
| 拓扑 Topology topology | 250 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
| 同源超家族 H-superfamily homologous superfamily | 1450 — |
| 结构域编号 domain_id | 2fugS02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 11540 — NADH-ubiquinone oxidoreductase 51kDa subunit |
| 结构域编号 domain_id | 2fugS03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 20 — Ubiquitin-like (UB roll) |
| 同源超家族 H-superfamily homologous superfamily | 600 — |
| 结构域编号 domain_id | 2fugS04 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1440 — de novo design (two linked rop proteins) |
| 同源超家族 H-superfamily homologous superfamily | 230 — NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain |
| 结构域编号 domain_id | 2fugT01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 1590 — NADH-quinone oxidoreductase subunit E |
| 结构域编号 domain_id | 2fugT02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 30 — Glutaredoxin |
| 同源超家族 H-superfamily homologous superfamily | 10 — Glutaredoxin |
| 结构域编号 domain_id | 2fugV00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 645 — Cytochrome-c3 Hydrogenase; chain B |
| 同源超家族 H-superfamily homologous superfamily | 10 — Cytochrome-c3 Hydrogenase, chain B |
| 结构域编号 domain_id | 2fugX00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 12280 — |
| 结构域编号 domain_id | 2fugY00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 70 — Alpha-Beta Plaits |
| 同源超家族 H-superfamily homologous superfamily | 3270 — |
| 结构域编号 domain_id | 2fugZ00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 920 — Metal Transport, Frataxin; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 80 — NADH-quinone oxidoreductase, subunit 15 |