2ja7
CPD lesion containing RNA Polymerase II elongation complex C
SAXS 散射曲线 SAXS Profile
P(r) 距离分布 P(r) Distribution
1. 结构基本信息 1. Structure Basics
| 条目编号 entry_id | 2ja7 |
| 沉积日期 deposition_date | 2006-11-23 |
| 结构标题 title | CPD lesion containing RNA Polymerase II elongation complex C |
| 关键词 keywords | ;DNA-DIRECTED RNA POLYMERASE, LESION RECOGNITION, TRANSFERASE/DNA/RNA, DNA DAMAGE, ZINC-FINGER, DNA-BINDING, PHOTOLESION, PHOSPHORYLATION, MISINCORPORATION, RNA POLYMERASE II, TRANSCRIPTION-COUPLED REPAIR, CYCLOBUTANE PYRIMIDINE DIMER, TCR, CPD, ARREST, STALLING, DNA LESION, METAL-BINDING, NUCLEAR PROTEIN, TRANSCRIPTION BUBBLE, NUCLEOTIDYLTRANSFERASE, DAMAGE RECOGNITION, ELONGATION COMPLEX, TRANSFERASE, THYMINE DIMER, TRANSCRIPTION ;; TRANSFERASE |
| 实验方法 method | X-RAY DIFFRACTION |
2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)
| 回转半径 Rg (Guinier) rg_guinier | 84.36 Å |
| 回转半径 Rg (电子) rg_electron | 85.10 Å |
| 零角强度 I(0) i0 | 11908600000.00 |
| 分子量 molecular_weight | 912530.0 kDa |
| 排除体积 excluded_volume | 1136100 ų |
| 包络体积 envelope_volume | 1833600 ų |
| 水化壳体积 shell_volume | 179940 ų |
| 包络直径 envelope_diameter | 268.5 Å |
| 壳层 Rg shell_rg | 79.64 Å |
| 包络 Rg envelope_rg | 82.16 Å |
| 形状 Rg shape_rg | 85.15 Å |
| 总 Rg total_rg | 84.87 Å |
| 总原子数 total_atoms | 63924 |
| 残基数 n_residues | 7922 |
| 球谐函数阶数 n_harmonics | 20 |
| q 范围 q_range | — – 0.5000 Å−1 |
| 数据点数 n_points | 101 |
| 壳层类型 shell_type | directional |
| 溶剂电子密度 solvent_density | 0.3340 e/ų |
| 壳层衬度 contrast_shell | 0.0300 e/ų |
| CRYSOL 版本 crysol_version | 4.1.3 |
3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)
| 最大尺寸 Dmax dmax | 225.8 Å |
| Rg (实空间) rg_real | 81.74 Å |
| Rg 误差 (实空间) rg_real_error | 0.84 Å |
| I(0) (实空间) i0_real | 1.1450e+10 |
| I(0) 误差 (实空间) i0_real_error | 1.8720e+08 |
| Rg (倒空间) rg_reciprocal | 81.79 Å |
| I(0) (倒空间) i0_reciprocal | 11820000000.0000 |
| 解质量估计 total_estimate | 0.8871 |
| 解质量评级 solution_quality | GOOD a GOOD solution |
| P(r) 峰数 n_peaks | 1 |
| 主峰位置 r_peak_primary | 62.7 Å |
| 偏度 Skewness skewness | 0.348 |
| 峰度 Kurtosis kurtosis | -0.887 |
| 角度范围 angular_range | — – 0.0900 Å−1 |
| 当前正则化参数 α current_alpha | 1.2910 |
| 最高正则化参数 α highest_alpha | 1549000000.0000 |
| 实空间数据点数 n_real_points | 19 |
| GNOM 版本 gnom_version | 4.1.3 |
| 质量判据 quality_criteria | AN1: 0.000; Oscil: 0.925; Stabil: 0.968; Sysdev: 1.000; Positv: 1.000; Valcen: 0.854; Smooth: 0.000 |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合体信息 (17)
6. 折叠分类 (SCOP + CATH) 80 domains
SCOP 2.08 (32 domains)
| 结构域编号 domain_id | d2ja7a1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.29 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 超家族 Superfamily superfamily | e.29.1 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 家族 Family family | e.29.1.2 — RNA-polymerase beta-prime |
| 结构域编号 domain_id | d2ja7b1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.29 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 超家族 Superfamily superfamily | e.29.1 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 家族 Family family | e.29.1.1 — RNA-polymerase beta |
| 结构域编号 domain_id | d2ja7c1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.74 — DCoH-like |
| 超家族 Superfamily superfamily | d.74.3 — RBP11-like subunits of RNA polymerase |
| 家族 Family family | d.74.3.1 — RNA polymerase alpha subunit dimerisation domain |
| 结构域编号 domain_id | d2ja7c2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.181 — Insert subdomain of RNA polymerase alpha subunit |
| 超家族 Superfamily superfamily | d.181.1 — Insert subdomain of RNA polymerase alpha subunit |
| 家族 Family family | d.181.1.1 — Insert subdomain of RNA polymerase alpha subunit |
| 结构域编号 domain_id | d2ja7d1 |
| 类 Class class | i — Low resolution protein structures |
| 折叠类型 Fold fold | i.8 — RNA polymerase |
| 超家族 Superfamily superfamily | i.8.1 — RNA polymerase |
| 家族 Family family | i.8.1.1 — RNA polymerase |
| 结构域编号 domain_id | d2ja7e1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.52 — Restriction endonuclease-like |
| 超家族 Superfamily superfamily | c.52.3 — Eukaryotic RPB5 N-terminal domain |
| 家族 Family family | c.52.3.1 — Eukaryotic RPB5 N-terminal domain |
| 结构域编号 domain_id | d2ja7e2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.78 — RPB5-like RNA polymerase subunit |
| 超家族 Superfamily superfamily | d.78.1 — RPB5-like RNA polymerase subunit |
| 家族 Family family | d.78.1.1 — RPB5 |
| 结构域编号 domain_id | d2ja7f1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.143 — RPB6/omega subunit-like |
| 超家族 Superfamily superfamily | a.143.1 — RPB6/omega subunit-like |
| 家族 Family family | a.143.1.2 — RPB6 |
| 结构域编号 domain_id | d2ja7g1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.40 — OB-fold |
| 超家族 Superfamily superfamily | b.40.4 — Nucleic acid-binding proteins |
| 家族 Family family | b.40.4.5 — Cold shock DNA-binding domain-like |
| 结构域编号 domain_id | d2ja7g2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.230 — Dodecin subunit-like |
| 超家族 Superfamily superfamily | d.230.1 — N-terminal, heterodimerisation domain of RBP7 (RpoE) |
| 家族 Family family | d.230.1.1 — N-terminal, heterodimerisation domain of RBP7 (RpoE) |
| 结构域编号 domain_id | d2ja7h1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.40 — OB-fold |
| 超家族 Superfamily superfamily | b.40.4 — Nucleic acid-binding proteins |
| 家族 Family family | b.40.4.8 — RNA polymerase subunit RBP8 |
| 结构域编号 domain_id | d2ja7i1 |
| 类 Class class | g — Small proteins |
| 折叠类型 Fold fold | g.41 — Rubredoxin-like |
| 超家族 Superfamily superfamily | g.41.3 — Zinc beta-ribbon |
| 家族 Family family | g.41.3.1 — Transcriptional factor domain |
| 结构域编号 domain_id | d2ja7i2 |
| 类 Class class | g — Small proteins |
| 折叠类型 Fold fold | g.41 — Rubredoxin-like |
| 超家族 Superfamily superfamily | g.41.3 — Zinc beta-ribbon |
| 家族 Family family | g.41.3.1 — Transcriptional factor domain |
| 结构域编号 domain_id | d2ja7j1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.4 — DNA/RNA-binding 3-helical bundle |
| 超家族 Superfamily superfamily | a.4.11 — RNA polymerase subunit RPB10 |
| 家族 Family family | a.4.11.1 — RNA polymerase subunit RPB10 |
| 结构域编号 domain_id | d2ja7k1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.74 — DCoH-like |
| 超家族 Superfamily superfamily | d.74.3 — RBP11-like subunits of RNA polymerase |
| 家族 Family family | d.74.3.2 — RBP11/RpoL |
| 结构域编号 domain_id | d2ja7l1 |
| 类 Class class | g — Small proteins |
| 折叠类型 Fold fold | g.41 — Rubredoxin-like |
| 超家族 Superfamily superfamily | g.41.9 — RNA polymerase subunits |
| 家族 Family family | g.41.9.2 — RBP12 subunit of RNA polymerase II |
| 结构域编号 domain_id | d2ja7m1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.29 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 超家族 Superfamily superfamily | e.29.1 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 家族 Family family | e.29.1.2 — RNA-polymerase beta-prime |
| 结构域编号 domain_id | d2ja7n1 |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.29 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 超家族 Superfamily superfamily | e.29.1 — beta and beta-prime subunits of DNA dependent RNA-polymerase |
| 家族 Family family | e.29.1.1 — RNA-polymerase beta |
| 结构域编号 domain_id | d2ja7o1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.74 — DCoH-like |
| 超家族 Superfamily superfamily | d.74.3 — RBP11-like subunits of RNA polymerase |
| 家族 Family family | d.74.3.1 — RNA polymerase alpha subunit dimerisation domain |
| 结构域编号 domain_id | d2ja7o2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.181 — Insert subdomain of RNA polymerase alpha subunit |
| 超家族 Superfamily superfamily | d.181.1 — Insert subdomain of RNA polymerase alpha subunit |
| 家族 Family family | d.181.1.1 — Insert subdomain of RNA polymerase alpha subunit |
| 结构域编号 domain_id | d2ja7p1 |
| 类 Class class | i — Low resolution protein structures |
| 折叠类型 Fold fold | i.8 — RNA polymerase |
| 超家族 Superfamily superfamily | i.8.1 — RNA polymerase |
| 家族 Family family | i.8.1.1 — RNA polymerase |
| 结构域编号 domain_id | d2ja7q1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.52 — Restriction endonuclease-like |
| 超家族 Superfamily superfamily | c.52.3 — Eukaryotic RPB5 N-terminal domain |
| 家族 Family family | c.52.3.1 — Eukaryotic RPB5 N-terminal domain |
| 结构域编号 domain_id | d2ja7q2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.78 — RPB5-like RNA polymerase subunit |
| 超家族 Superfamily superfamily | d.78.1 — RPB5-like RNA polymerase subunit |
| 家族 Family family | d.78.1.1 — RPB5 |
| 结构域编号 domain_id | d2ja7r1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.143 — RPB6/omega subunit-like |
| 超家族 Superfamily superfamily | a.143.1 — RPB6/omega subunit-like |
| 家族 Family family | a.143.1.2 — RPB6 |
| 结构域编号 domain_id | d2ja7s1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.40 — OB-fold |
| 超家族 Superfamily superfamily | b.40.4 — Nucleic acid-binding proteins |
| 家族 Family family | b.40.4.5 — Cold shock DNA-binding domain-like |
| 结构域编号 domain_id | d2ja7s2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.230 — Dodecin subunit-like |
| 超家族 Superfamily superfamily | d.230.1 — N-terminal, heterodimerisation domain of RBP7 (RpoE) |
| 家族 Family family | d.230.1.1 — N-terminal, heterodimerisation domain of RBP7 (RpoE) |
| 结构域编号 domain_id | d2ja7t1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.40 — OB-fold |
| 超家族 Superfamily superfamily | b.40.4 — Nucleic acid-binding proteins |
| 家族 Family family | b.40.4.8 — RNA polymerase subunit RBP8 |
| 结构域编号 domain_id | d2ja7u1 |
| 类 Class class | g — Small proteins |
| 折叠类型 Fold fold | g.41 — Rubredoxin-like |
| 超家族 Superfamily superfamily | g.41.3 — Zinc beta-ribbon |
| 家族 Family family | g.41.3.1 — Transcriptional factor domain |
| 结构域编号 domain_id | d2ja7u2 |
| 类 Class class | g — Small proteins |
| 折叠类型 Fold fold | g.41 — Rubredoxin-like |
| 超家族 Superfamily superfamily | g.41.3 — Zinc beta-ribbon |
| 家族 Family family | g.41.3.1 — Transcriptional factor domain |
| 结构域编号 domain_id | d2ja7v1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.4 — DNA/RNA-binding 3-helical bundle |
| 超家族 Superfamily superfamily | a.4.11 — RNA polymerase subunit RPB10 |
| 家族 Family family | a.4.11.1 — RNA polymerase subunit RPB10 |
| 结构域编号 domain_id | d2ja7w1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.74 — DCoH-like |
| 超家族 Superfamily superfamily | d.74.3 — RBP11-like subunits of RNA polymerase |
| 家族 Family family | d.74.3.2 — RBP11/RpoL |
| 结构域编号 domain_id | d2ja7x1 |
| 类 Class class | g — Small proteins |
| 折叠类型 Fold fold | g.41 — Rubredoxin-like |
| 超家族 Superfamily superfamily | g.41.9 — RNA polymerase subunits |
| 家族 Family family | g.41.9.2 — RBP12 subunit of RNA polymerase II |
CATH v4.4 (48 domains)
| 结构域编号 domain_id | 2ja7A03 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 40 — Barwin-like endoglucanases |
| 同源超家族 H-superfamily homologous superfamily | 20 — |
| 结构域编号 domain_id | 2ja7A04 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1490 — Dna Ligase; domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 180 — RNA polymerase ii |
| 结构域编号 domain_id | 2ja7A05 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 274 — Enzyme I; Chain A, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 100 — RNA polymerase Rpb1, domain 3 |
| 结构域编号 domain_id | 2ja7A06 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 132 — Topoisomerase I; Chain A, domain 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — RNA polymerase Rpb1 funnel domain |
| 结构域编号 domain_id | 2ja7A09 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1360 — Gyrase A; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 140 — |
| 结构域编号 domain_id | 2ja7B04 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1110 — Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase Rpb2, domain 2 |
| 结构域编号 domain_id | 2ja7B05 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1070 — Hypothetical Protein Ta0175; Chain: A, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 20 — |
| 结构域编号 domain_id | 2ja7B06 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 270 — Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 |
| 同源超家族 H-superfamily homologous superfamily | 10 — DNA-directed RNA polymerase, subunit 2, domain 6 |
| 结构域编号 domain_id | 2ja7B07 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P) |
| 同源超家族 H-superfamily homologous superfamily | 150 — RNA polymerase II, Rpb2 subunit, wall domain |
| 结构域编号 domain_id | 2ja7B08 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1800 — DCoH-like |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase alpha subunit dimerisation domain |
| 结构域编号 domain_id | 2ja7C01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1360 — Gyrase A; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase, RBP11-like subunit |
| 结构域编号 domain_id | 2ja7C02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 170 — Beta Complex |
| 拓扑 Topology topology | 120 — RNA Polymerase Alpha Subunit; Chain A, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 12 — DNA-directed RNA polymerase, insert domain |
| 结构域编号 domain_id | 2ja7D02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1250 — Growth Hormone; Chain: A; |
| 同源超家族 H-superfamily homologous superfamily | 40 — RNA Polymerase II, Rpb4 subunit |
| 结构域编号 domain_id | 2ja7E01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 1340 — Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase, Rpb5, N-terminal domain |
| 结构域编号 domain_id | 2ja7E02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 940 — Eukaryotic RPB6 RNA polymerase subunit |
| 同源超家族 H-superfamily homologous superfamily | 20 — RPB5-like RNA polymerase subunit |
| 结构域编号 domain_id | 2ja7F00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 940 — Eukaryotic RPB6 RNA polymerase subunit |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase subunit, RPB6/omega |
| 结构域编号 domain_id | 2ja7G01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1490 — Dna Ligase; domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 120 — RNA polymerase Rpb7-like, N-terminal domain |
| 结构域编号 domain_id | 2ja7G02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P) |
| 同源超家族 H-superfamily homologous superfamily | 140 — Nucleic acid-binding proteins |
| 结构域编号 domain_id | 2ja7H00 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P) |
| 同源超家族 H-superfamily homologous superfamily | 140 — Nucleic acid-binding proteins |
| 结构域编号 domain_id | 2ja7I01 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 25 — N-terminal domain of TfIIb |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 2ja7I02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 25 — N-terminal domain of TfIIb |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 2ja7J00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 60 — Homeodomain-like |
| 结构域编号 domain_id | 2ja7K00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1360 — Gyrase A; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase, RBP11-like subunit |
| 结构域编号 domain_id | 2ja7L00 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 28 — Rubrerythrin, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 30 — RNA polymerase ii, chain L |
| 结构域编号 domain_id | 2ja7M03 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 40 — Barwin-like endoglucanases |
| 同源超家族 H-superfamily homologous superfamily | 20 — |
| 结构域编号 domain_id | 2ja7M04 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1490 — Dna Ligase; domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 180 — RNA polymerase ii |
| 结构域编号 domain_id | 2ja7M05 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 274 — Enzyme I; Chain A, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 100 — RNA polymerase Rpb1, domain 3 |
| 结构域编号 domain_id | 2ja7M06 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 132 — Topoisomerase I; Chain A, domain 4 |
| 同源超家族 H-superfamily homologous superfamily | 30 — RNA polymerase Rpb1 funnel domain |
| 结构域编号 domain_id | 2ja7M09 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1360 — Gyrase A; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 140 — |
| 结构域编号 domain_id | 2ja7N04 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1110 — Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase Rpb2, domain 2 |
| 结构域编号 domain_id | 2ja7N05 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1070 — Hypothetical Protein Ta0175; Chain: A, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 20 — |
| 结构域编号 domain_id | 2ja7N06 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 270 — Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 |
| 同源超家族 H-superfamily homologous superfamily | 10 — DNA-directed RNA polymerase, subunit 2, domain 6 |
| 结构域编号 domain_id | 2ja7N07 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P) |
| 同源超家族 H-superfamily homologous superfamily | 150 — RNA polymerase II, Rpb2 subunit, wall domain |
| 结构域编号 domain_id | 2ja7N08 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 1800 — DCoH-like |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase alpha subunit dimerisation domain |
| 结构域编号 domain_id | 2ja7O01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1360 — Gyrase A; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase, RBP11-like subunit |
| 结构域编号 domain_id | 2ja7O02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 170 — Beta Complex |
| 拓扑 Topology topology | 120 — RNA Polymerase Alpha Subunit; Chain A, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 12 — DNA-directed RNA polymerase, insert domain |
| 结构域编号 domain_id | 2ja7P02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 1250 — Growth Hormone; Chain: A; |
| 同源超家族 H-superfamily homologous superfamily | 40 — RNA Polymerase II, Rpb4 subunit |
| 结构域编号 domain_id | 2ja7Q01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 1340 — Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase, Rpb5, N-terminal domain |
| 结构域编号 domain_id | 2ja7Q02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 940 — Eukaryotic RPB6 RNA polymerase subunit |
| 同源超家族 H-superfamily homologous superfamily | 20 — RPB5-like RNA polymerase subunit |
| 结构域编号 domain_id | 2ja7R00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 940 — Eukaryotic RPB6 RNA polymerase subunit |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase subunit, RPB6/omega |
| 结构域编号 domain_id | 2ja7S01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1490 — Dna Ligase; domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 120 — RNA polymerase Rpb7-like, N-terminal domain |
| 结构域编号 domain_id | 2ja7S02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P) |
| 同源超家族 H-superfamily homologous superfamily | 140 — Nucleic acid-binding proteins |
| 结构域编号 domain_id | 2ja7T00 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P) |
| 同源超家族 H-superfamily homologous superfamily | 140 — Nucleic acid-binding proteins |
| 结构域编号 domain_id | 2ja7U01 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 25 — N-terminal domain of TfIIb |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 2ja7U02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 25 — N-terminal domain of TfIIb |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 2ja7V00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 60 — Homeodomain-like |
| 结构域编号 domain_id | 2ja7W00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1360 — Gyrase A; domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — RNA polymerase, RBP11-like subunit |
| 结构域编号 domain_id | 2ja7X00 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 20 — Single Sheet |
| 拓扑 Topology topology | 28 — Rubrerythrin, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 30 — RNA polymerase ii, chain L |