3ci2

REFINEMENT OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF BARLEY SERINE PROTEINASE INHIBITOR 2 AND COMPARISON WITH THE STRUCTURES IN CRYSTALS

Method: SOLUTION NMR Dmax: 35.8 Å Quality: REASONABLE

1. Protein Identity and Related Structures Protein Identity & Related Structures

CHYMOTRYPSIN INHIBITOR 2

Hordeum vulgare

UniProt P01053

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein monomer Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 18–83 Not recorded No other associated polymer SOLUTION NMR mmCIF provides none of the parsed experimental conditions Resolution not provided

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

19 other PDB entries and 23 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ICI2_HORVU
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–66; UniProt 18–83

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 3ci2

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 3ci2
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2. Structure Basics 2. Structure Basics

Entry ID entry_id3ci2
Deposition date deposition_date1991-09-10
Structure title titleREFINEMENT OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF BARLEY SERINE PROTEINASE INHIBITOR 2 AND COMPARISON WITH THE STRUCTURES IN CRYSTALS
Keywords keywordsSERINE PROTEASE INHIBITOR; SERINE PROTEASE INHIBITOR
Experimental Method methodSOLUTION NMR

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier10.44
Radius of gyration Rg (electron density) rg_electron10.66
Forward intensity I(0) i0253556000.00
Molecular weight molecular_weight147420.0 kDa
Excluded volume excluded_volume190180 ų
Envelope volume envelope_volume14165 ų
Hydration-shell volume shell_volume10031 ų
Envelope diameter envelope_diameter40.9
Shell Rg shell_rg17.93
Envelope Rg envelope_rg12.42
Shape Rg shape_rg10.56
Total Rg total_rg11.25
Total atoms total_atoms21200
Residues n_residues1260
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax35.8
Rg (real space) rg_real10.34
Rg uncertainty (real space) rg_real_error0.33
I(0) (real space) i0_real2.5360e+08
I(0) uncertainty (real space) i0_real_error2.8750e+06
Rg (reciprocal space) rg_reciprocal10.34
I(0) (reciprocal space) i0_reciprocal253600000.0000
Solution quality estimate total_estimate0.6307
Solution quality rating solution_quality REASONABLE a REASONABLE solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary12.7
Skewness Skewness skewness-0.142
Kurtosis Kurtosis kurtosis-0.695
Angular range angular_range— – 0.5000 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha52970.0000
Real-space data points n_real_points80
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.698; Stabil: 1.000; Sysdev: 0.368; Positv: 1.000; Valcen: 1.000; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (1)

7. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd3ci2a_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.40 — CI-2 family of serine protease inhibitors
Superfamily Superfamily superfamilyd.40.1 — CI-2 family of serine protease inhibitors
Family Family familyd.40.1.1 — CI-2 family of serine protease inhibitors

CATH v4.4 (1 domains)

Domain ID domain_id3ci2A00
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology10 — Trypsin Inhibitor V; Chain A
Homologous superfamily homologous superfamily10 — Trypsin Inhibitor V, subunit A

8. Citations (8)

9. Files and Curves (10)