CELLULOSE 1,4-BETA-CELLOBIOSIDASE
TRICHODERMA REESEI QM9414
State in the Current Structure
| Assembly | Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Associated Components | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|
| 1 | Other combination Homooligomer Protein × 2 其他Polymer 4 PDB declaration: dimeric(2) Consistent with protein copy count | Chain A; UniProt 18–451 | Fragment:CATALYTIC MODULE, RESIDUES 18-451 Non-standard monomer:Yes (specific site not provided by mmCIF) | beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-2)-beta-D-xylopyranose × 2 beta-D-xylopyranose-(1-2)-beta-D-xylopyranose × 2 CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 XYP beta-D-xylopyranose × 2 | X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K | Resolution 1.68 Å R-free 0.186 |
Other States of the Same Protein in the Database
Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.
| Other PDB | Difference from Current Entry 4D5Q | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1AZ6 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 23 STRUCTURES Deposited 1997-11-25 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:CELLULOSE-BINDING DOMAIN
|
Mutation:Y5A | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 3.9;288 K
|
Resolution not provided |
| 1AZH THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 14 STRUCTURES Deposited 1997-11-18 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:CELLULOSE-BINDING DOMAIN
|
Mutation:Y5A | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 3.9;288 K
|
Resolution not provided |
| 1AZJ THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 18 STRUCTURES Deposited 1997-11-18 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:CELLULOSE-BINDING DOMAIN
|
Mutation:Y31A | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 3.9;288 K
|
Resolution not provided |
| 1AZK THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 19 STRUCTURES Deposited 1997-11-18 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:CELLULOSE-BINDING DOMAIN
|
Mutation:Y32A | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 3.9;288 K
|
Resolution not provided |
| 1CBH DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI. A STUDY USING NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING Deposited 1989-05-30 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR mmCIF provides none of the parsed conditions | Resolution not provided |
| 1DY4 CBH1 IN COMPLEX WITH S-PROPRANOLOL Deposited 2000-01-26 | Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 18-451
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 SNP 1-(ISOPROPYLAMINO)-3-(1-NAPHTHYLOXY)-2-PROPANOL × 1 CO COBALT (II) ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;HANGING DROPS. EQUAL VOLUMES OF 9 MG/ML PROTEIN/7.5 MM S-PROPRANOLOL AND RESERVOIR SOLUTION CONTAINING 0.1 M MES (PH 7.0), 24% (W/V) MONOMETHYL ETHER PEG 5000, 15% GLYCEROL AND 10 MM COCL2.
|
Resolution 1.90 Å R-free 0.220 |
| 1EGN CELLOBIOHYDROLASE CEL7A (E223S, A224H, L225V, T226A, D262G) MUTANT Deposited 2000-02-16 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 1 - 434
|
Mutation:E223S, A224H, L225V, T226A, D262G Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5;293 K;sodium acetate, PEG 5000 monomethyl-ether, glycerol, sodium morpholine-ethane-sulphonic acid, cobalt chloride , pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 1.60 Å R-free 0.270 |
| 1Q2B CELLOBIOHYDROLASE CEL7A WITH DISULPHIDE BRIDGE ADDED ACROSS EXO-LOOP BY MUTATIONS D241C AND D249C Deposited 2003-07-24 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC DOMAIN 1-434
|
Mutation:D241C, D249C Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;PEG 5000 monomethyl ether, sodium morpholine-ethane-sulphonic acid, glycerol,
cobalt chloride, sodium acetate, pH 6.00, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 1.60 Å R-free 0.223 |
| 2CBH DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI. A STUDY USING NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING Deposited 1989-05-30 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR mmCIF provides none of the parsed conditions | Resolution not provided |
| 2CEL ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE Deposited 1996-08-24 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
19–451(433 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 1 - 434
|
Mutation:E212Q Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;4.5 MM MES PH 6.0, 4.5% MONOMETHYL ETHER PEG 5000, 4.5 MM CACL2
|
Resolution 2.00 Å R-free 0.208 |
| 2CEL ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE Deposited 1996-08-24 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain B
19–451(433 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 1 - 434
|
Mutation:E212Q Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;4.5 MM MES PH 6.0, 4.5% MONOMETHYL ETHER PEG 5000, 4.5 MM CACL2
|
Resolution 2.00 Å R-free 0.208 |
| 2MWJ Solution structure of Family 1 Carbohydrate-Binding Module from Trichoderma reesei Cel7A with O-mannose residues at Thr1 and Ser3 Deposited 2014-11-12 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:CBM1 DOMAIN RESIDUES 478-513;
|
Not recorded | MAN alpha-D-mannopyranose × 2 |
SOLUTION NMR
NMR measurement conditions
pH 5;300 K;Ionic strength (raw mmCIF value) 30;Pressure ambient
NMR measurement conditions
pH 5;288 K;Ionic strength (raw mmCIF value) 30;Pressure ambient
NMR sample composition
1.7 mg CBM_2M, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
1.7 mg CBM_2M, 100% D2O | 100% D2O
|
Resolution not provided |
| 2MWK Family 1 Carbohydrate-Binding Module from Trichoderma reesei Cel7A with O-mannose residues at Thr1, Ser3, and Ser14 Deposited 2014-11-12 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:CBM1 domain residues 478-513
|
Not recorded | MAN alpha-D-mannopyranose × 3 |
SOLUTION NMR
NMR measurement conditions
pH 5;300 K;Ionic strength (raw mmCIF value) 30;Pressure ambient
NMR measurement conditions
pH 5;288 K;Ionic strength (raw mmCIF value) 30;Pressure ambient
NMR sample composition
1.5 mg CBM_3M, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
1.5 mg CBM_3M, 100% D2O | 100% D2O
|
Resolution not provided |
| 2V3I Hypocrea jecorina Cel7A in complex with (R)-dihydroxy-phenanthrenolol Deposited 2007-06-18 | Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 GOL GLYCEROL × 1 XX6 2-{[(2R)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5;298 K;POLYETHYLENE GLYCOL MONOMETHYL ETHER 5000, GLYCEROL, COBALT CHLORIDE, SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298 K
|
Resolution 1.05 Å R-free 0.140 |
| 2V3R Hypocrea jecorina Cel7A in complex with (S)-dihydroxy-phenanthrenolol Deposited 2007-06-21 | Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 CO COBALT (II) ION × 2 XX7 2-{[(2S)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5;298 K;POLYETHYLENE GLYCOL MONOMETHYL ETHER, GLYCEROL, COBALT CHLORIDE, SODIUM ACETATE PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298 K
|
Resolution 1.60 Å R-free 0.179 |
| 4C4C Michaelis complex of Hypocrea jecorina CEL7A E217Q mutant with cellononaose spanning the active site Deposited 2013-09-05 | Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 3 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PEG DI(HYDROXYETHYL)ETHER × 3 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12% GLYCEROL., VAPOR DIFFUSION - HANGING DROP
|
Resolution 1.45 Å R-free 0.196 |
| 4C4D Covalent glycosyl-enzyme intermediate of Hypocrea jecorina Cel7a E217Q mutant trapped using DNP-2-deoxy-2-fluoro-cellotrioside Deposited 2013-09-05 | Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 3 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PEG DI(HYDROXYETHYL)ETHER × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;PROTEIN FIRST INCUBATED WITH 80 UM 2,4-DINITROPHENYL-2-DEOXY-2-FLUORO-BETA-CELLOTRIOSIDE (DNP-2F-G3)4 IN 10 MM SODIUM MES, PH 6.0. ALIQUOTS WERE TAKEN AT REGULAR TIME INTERVALS AND CONCENTRATED FOR CRYSTALLISATION IN THE PRESENCE OF 1 MM FRESH DNP-2F-G3 ADDED TO THE CRYSTALLISATION DROPS. CRYSTALLISATION CONDITION: 0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12% GLYCEROL.
|
Resolution 1.32 Å R-free 0.187 |
| 4CEL ACTIVE-SITE MUTANT D214N DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE Deposited 1996-08-24 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
19–451(433 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 1 - 434
|
Mutation:D214N Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;4.5 MM MES PH 6.0, 9% PEG 6000, 4.5 MM CACL2
|
Resolution 2.20 Å R-free 0.239 |
| 4CEL ACTIVE-SITE MUTANT D214N DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE Deposited 1996-08-24 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain B
19–451(433 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 1 - 434
|
Mutation:D214N Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;4.5 MM MES PH 6.0, 9% PEG 6000, 4.5 MM CACL2
|
Resolution 2.20 Å R-free 0.239 |
| 4D5I Hypocrea jecorina cellobiohydrolase Cel7A E212Q soaked with xylotriose. Deposited 2014-11-05 | Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Other combination Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PEG DI(HYDROXYETHYL)ETHER × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
|
Resolution 1.42 Å R-free 0.230 |
| 4D5J Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylotriose. Deposited 2014-11-05 | Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION - HANGING DROP
|
Resolution 1.50 Å R-free 0.199 |
| 4D5O Hypocrea jecorina cellobiohydrolase Cel7A E212Q soaked with xylopentaose. Deposited 2014-11-07 | Different mutation/modification Different ligand/ion Different structure-quality metrics | Assembly 1 Other combination Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 GOL GLYCEROL × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
|
Resolution 1.52 Å R-free 0.250 |
| 4D5P Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylopentaose. Deposited 2014-11-07 | Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL. VAPOR DIFFUSION - HANGING DROP
|
Resolution 1.89 Å R-free 0.268 |
| 4D5V Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylotetraose. Deposited 2014-11-07 | Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Homooligomer;Protein × 2 PDB declaration: dimeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES [E217Q] Non-standard monomer:Yes (specific site not provided by mmCIF) | CO COBALT (II) ION × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION - HANGING DROP
|
Resolution 1.62 Å R-free 0.179 |
| 4P1H Crystal structure of wild type Hypocrea jecorina Cel7a in a monoclinic crystal form Deposited 2014-02-26 | Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–449(432 aa)
Fragment:Catalytic Domain (UNP residues 18-449)
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 SM SAMARIUM (III) ION × 1 BEN BENZAMIDINE × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;308 K;PEG3350, Benzamidine, Gadolinium(III) chloride hexahydrate, HEPES
|
Resolution 1.50 Å R-free 0.190 |
| 4P1J Crystal structure of wild type Hypocrea jecorina Cel7a in a hexagonal crystal form Deposited 2014-02-26 | Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:UNP residues 18-451
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 SM SAMARIUM (III) ION × 5 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;308 K;PEG 6000, Cellohexaose, Samarium(III) chloride hexahydrate, HEPES
|
Resolution 2.62 Å R-free 0.213 |
| 4UWT Hypocrea jecorina Cel7A E212Q mutant in complex with p-nitrophenyl cellobioside Deposited 2014-08-14 | Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Mutation:YES Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 GOL GLYCEROL × 1 NPO P-NITROPHENOL × 2 PEG DI(HYDROXYETHYL)ETHER × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 21% MONOMETHYL ETHER PEG 5000, 0.005 M COCL2, 12% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
|
Resolution 1.20 Å R-free 0.159 |
| 4V0Z o-nitrophenyl Cellobioside as an Active Site Probe for Family 7 Cellobiohydrolases Deposited 2014-09-19 | Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
Fragment:CATALYTIC MODULE, RESIDUES 18-451
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 GOL GLYCEROL × 1 OPO O-NITROPHENOL × 2 PEG DI(HYDROXYETHYL)ETHER × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 7;0.1 M NAMES (PH 7.0), 25% M5K, 12.5% GLYCEROL AND 10 MM COCL2
|
Resolution 1.70 Å R-free 0.157 |
| 5OA5 CELLOBIOHYDROLASE I (CEL7A) FROM HYPOCREA JECORINA WITH IMPROVED THERMAL STABILITY Deposited 2017-06-20 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
19–451(433 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 18-451
|
Mutation:S8P, T41I, N49S, A68T, N89D, S92T, S113N, S196T, P227L, D249K, T255P, S278P, E295K, T296P, T332Y, V304D, S411F Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;293 K;25.5% POLYETHYLENE GLYCOL (PEG)
4000, 0.17 M AMSO4 AND 15% GLYCEROL
|
Resolution 2.10 Å R-free 0.244 |
| 5OA5 CELLOBIOHYDROLASE I (CEL7A) FROM HYPOCREA JECORINA WITH IMPROVED THERMAL STABILITY Deposited 2017-06-20 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 2 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain B
19–451(433 aa)
Fragment:CATALYTIC DOMAIN, RESIDUES 18-451
|
Mutation:S8P, T41I, N49S, A68T, N89D, S92T, S113N, S196T, P227L, D249K, T255P, S278P, E295K, T296P, T332Y, V304D, S411F Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 GOL GLYCEROL × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;293 K;25.5% POLYETHYLENE GLYCOL (PEG)
4000, 0.17 M AMSO4 AND 15% GLYCEROL
|
Resolution 2.10 Å R-free 0.244 |
| 5X34 Solution structure of the Family 1 carbohydrate-binding module, unglycosylated form Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 5X35 Solution structure of the Family 1 carbohydrate-binding module with mannosylated Thr1 Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Not recorded | MAN alpha-D-mannopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 5X36 Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser3 Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Not recorded | MAN alpha-D-mannopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 5X37 Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser14 Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Not recorded | MAN alpha-D-mannopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 5X38 Solution structure of the Family 1 carbohydrate-binding module with glucosylated Ser3 Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Not recorded | BGC beta-D-glucopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 5X39 Solution structure of the Family 1 carbohydrate-binding module Q2A mutant with mannosylated Ser3 Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Mutation:Q2A | MAN alpha-D-mannopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM-Q2A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM-Q2A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 5X3C Solution structure of the Family 1 carbohydrate-binding module Y5A mutant with mannosylated Ser3 Deposited 2017-02-04 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Mutation:Y5A | MAN alpha-D-mannopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
5 mg/mL CBM-Y5A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
5 mg/mL CBM-Y5A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 6GRN CELLOBIOHYDROLASE I (CEL7A) FROM Trichoderma reesei with S-dihydroxypropranolol in the active site Deposited 2018-06-11 | Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
19–451(433 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 F9B 2-[[(2~{S})-3-naphthalen-1-yloxy-2-oxidanyl-propyl]amino]propane-1,3-diol × 1 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5;293 K;18% mPEG 5000, 10 mM sodium acetate (ph 5.0), 14% glycerol, 11 mM cobalt chloride
|
Resolution 1.79 Å R-free 0.188 |
| 7NYT Trichoderma reesei Cel7A E212Q mutant in complex with lactose. Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
|
Mutation:E212Q Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 BGC beta-D-glucopyranose × 1 GAL beta-D-galactopyranose × 1 NPO P-NITROPHENOL × 1 CO COBALT (II) ION × 2 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;294 K;50 mM morpholinoethane sulphonic acid (pH 6.0), 21.25% polyethylene glycol 5000 monomethyl ether, 12.5% glycerol, 5 mM cobalt chloride
|
Resolution 1.09 Å R-free 0.142 |
| 7OC8 Trichoderma reesei Cel7A E212Q mutant in complex with pNPL Deposited 2021-04-26 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
18–451(434 aa)
|
Mutation:E212Q Non-standard monomer:Yes (specific site not provided by mmCIF) | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 NPO P-NITROPHENOL × 2 CO COBALT (II) ION × 4 |
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6;294 K;50 mM morpholinoethane sulphonic acid(pH 6.0), 21.25% polyethylene glycol 5000 monomethyl ether, 12.5% glycerol, 5 mM cobalt chloride
|
Resolution 1.60 Å R-free 0.184 |
| 7YHF Solution structure of S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei Deposited 2022-07-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
|
Mutation:S3C | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
4 mg/mL CBMS3C, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
2 mg/mL CBMS3C, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 7YHG Solution structure of S-mono-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei Deposited 2022-07-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
|
Not recorded | MAN alpha-D-mannopyranose × 1 |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
4 mg/mL CBMS3C-Man, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
4 mg/L CBMS3C-Man, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 7YHH Solution structure of S-di-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei Deposited 2022-07-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
4 mg/mL CBMS3C-ManMan, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
4 mg/mL CBMS3C-ManMan, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
|
Resolution not provided |
| 7YHI Solution structure of O-di-mannosylated carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei Deposited 2022-07-13 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric |
Chain A
478–513(36 aa)
Fragment:UNP residues 478-513
|
Not recorded | No recorded non-water small molecule |
SOLUTION NMR
NMR measurement conditions
pH 5;298 K;Ionic strength (raw mmCIF value) 50;Pressure 1
NMR sample composition
4 mg/mL CBM020, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
4 mg/mL CBM020, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
|
Resolution not provided |
41 other PDB entries and 44 assemblies. Open the comparison page and filter oligomeric states
View Construct and Data Evidence
| UniProt name | GUX1_HYPJE |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A; PDBConstruct 1–434; UniProt 18–451 |