|
1LNQ
CRYSTAL STRUCTURE OF MTHK AT 3.3 A
Deposited 2002-05-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;PEGMME350, CaCl2, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 3.30 Å
R-free 0.318
|
|
2AEF
Crystal Structures of the MthK RCK Domain in Ca2+ bound form
Deposited 2005-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:isoform Soluble
Chain B
107–336(230 aa)
Fragment:isoform Soluble
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.5;293 K;PEG 4000, calcium chloride, Ammonium formate, sodium acetate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.70 Å
R-free 0.268
|
|
2AEJ
Crystal Structures of the MthK RCK Domain in no Ca2+ bound form
Deposited 2005-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:isoform Soluble
Chain B
107–336(230 aa)
Fragment:isoform Soluble
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 4.5;293 K;PEG 4000, Ammonium formate, sodium acetate , pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.10 Å
R-free 0.245
|
|
2AEM
Crystal Structures of the MthK RCK Domain
Deposited 2005-07-22
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;PEG 400, Ammonium sulfate, cacodylate , pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.80 Å
R-free 0.263
|
|
2FY8
Crystal structure of MthK rck domain in its ligand-free gating-ring form
Deposited 2006-02-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
Chain B
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
Chain C
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
Chain D
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
|
Mutation:D184N
Mutation:D184N
Mutation:D184N
Mutation:D184N
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;0.6 M Na/K PO4, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.79 Å
R-free 0.254
|
|
2FY8
Crystal structure of MthK rck domain in its ligand-free gating-ring form
Deposited 2006-02-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain E
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
Chain F
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
Chain G
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
Chain H
107–336(230 aa)
Fragment:soluble isoform, residues 107-336
|
Mutation:D184N
Mutation:D184N
Mutation:D184N
Mutation:D184N
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;0.6 M Na/K PO4, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.79 Å
R-free 0.254
|
|
2OGU
Crystal structure of the isolated MthK RCK domain
Deposited 2007-01-08
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:RCK domain: Residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1M Sodium cacodylate pH 6.5, 1.3-1.5M Lithium sulfate, 2% Benzamidine-HCl, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 3.23 Å
R-free 0.299
|
|
2OGU
Crystal structure of the isolated MthK RCK domain
Deposited 2007-01-08
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 6
PDB declaration: hexameric
|
Chain A
107–336(230 aa)
Fragment:RCK domain: Residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;0.1M Sodium cacodylate pH 6.5, 1.3-1.5M Lithium sulfate, 2% Benzamidine-HCl, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 3.23 Å
R-free 0.299
|
|
3KXD
Crystal structure of the mthk rck in complex with cadmium
Deposited 2009-12-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
116–336(221 aa)
Fragment:RCK DOMAIN
Chain B
116–336(221 aa)
Fragment:RCK DOMAIN
|
Not recorded
|
CD CADMIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.7;318 K;1M NH4-FORMATE, 10% PEG 4000, 0.1M NA ACETATE, PH 4.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 318K
|
Resolution 2.20 Å
R-free 0.254
|
|
3LDC
High resolution open MthK pore structure crystallized in 100 mM K+
Deposited 2010-01-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:MthK K+ channel, residues 28-99
|
Mutation:S68H, V77C
|
K POTASSIUM ION × 20
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;3.0-3.5 M 1,6-Hexandiol, 100 mM HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.45 Å
R-free 0.202
|
|
3LDD
High resolution open MthK pore structure crystallized in 100 mM K+ and further soaked in 99 mM Na+/1 mM K+.
Deposited 2010-01-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:MthK K+ channel, residues 28-99
|
Mutation:S68R, V77C
|
K POTASSIUM ION × 20
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;3.0-3.5 M 1,6-Hexandiol, 100 mM HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.45 Å
R-free 0.216
|
|
3LDE
High resolution open MthK pore structure crystallized in 100 mM K+ and further soaked in 100 mM Na+.
Deposited 2010-01-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:MthK K+ channel, residues 28-99
|
Mutation:S68H, V77C
|
NA SODIUM ION × 16
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;293 K;3.0-3.5 M 1,6-Hexandiol, 100 mM HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.21 Å
R-free 0.208
|
|
3OUS
MthK channel pore T59A mutant
Deposited 2010-09-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
|
Mutation:T59A
|
K POTASSIUM ION × 20
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;1M 1,6-hexanediol, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.75 Å
R-free 0.236
|
|
3R65
MthK channel pore E92Q mutant
Deposited 2011-03-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:CALCIUM-GATED POTASSIUM CHANNEL MTHK PORE (UNP Residues 18-99)
|
Mutation:E92Q
|
K POTASSIUM ION × 16
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;293 K;3.0-3.5 M 1,6-Hexandiol, 100 mM MES, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.80 Å
R-free 0.225
|
|
3RBX
MthK RCK domain D184N mutant, Ca2+-bound
Deposited 2011-03-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:unp residues 107-336
Chain B
107–336(230 aa)
Fragment:unp residues 107-336
|
Mutation:D184N
Mutation:D184N
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.7;295 K;20% PEG 3350, 0.1 M CaCl2, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K, pH 5.7
|
Resolution 2.80 Å
R-free 0.274
|
|
3RBX
MthK RCK domain D184N mutant, Ca2+-bound
Deposited 2011-03-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain C
107–336(230 aa)
Fragment:unp residues 107-336
Chain D
107–336(230 aa)
Fragment:unp residues 107-336
|
Mutation:D184N
Mutation:D184N
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.7;295 K;20% PEG 3350, 0.1 M CaCl2, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K, pH 5.7
|
Resolution 2.80 Å
R-free 0.274
|
|
3RBX
MthK RCK domain D184N mutant, Ca2+-bound
Deposited 2011-03-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain E
107–336(230 aa)
Fragment:unp residues 107-336
Chain F
107–336(230 aa)
Fragment:unp residues 107-336
|
Mutation:D184N
Mutation:D184N
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.7;295 K;20% PEG 3350, 0.1 M CaCl2, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K, pH 5.7
|
Resolution 2.80 Å
R-free 0.274
|
|
3RBZ
MthK channel, Ca2+-bound
Deposited 2011-03-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
|
Mutation:G85A, E92A, E96T, M107I
Mutation:G85A, E92A, E96T, M107I
Mutation:G85A, E92A, E96T, M107I
Mutation:G85A, E92A, E96T, M107I
|
CA CALCIUM ION × 24
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;295 K;26% PEG 350-MME, 0.2 M CaCl2, 0.1 M MES, VAPOR DIFFUSION, HANGING DROP, temperature 295K, pH 6.5
|
Resolution 3.40 Å
R-free 0.288
|
|
4HYO
Crystal Structure of MthK Pore
Deposited 2012-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
11–101(91 aa)
Fragment:unp residues 11-101
Chain B
11–101(91 aa)
Fragment:unp residues 11-101
Chain C
11–101(91 aa)
Fragment:unp residues 11-101
Chain D
11–101(91 aa)
Fragment:unp residues 11-101
|
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
|
K POTASSIUM ION × 4
HEZ HEXANE-1,6-DIOL × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;3.5-4.0M 1,6-hexanediol, 100mM MES , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.65 Å
R-free 0.181
|
|
4HYO
Crystal Structure of MthK Pore
Deposited 2012-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain E
11–101(91 aa)
Fragment:unp residues 11-101
Chain F
11–101(91 aa)
Fragment:unp residues 11-101
Chain G
11–101(91 aa)
Fragment:unp residues 11-101
Chain H
11–101(91 aa)
Fragment:unp residues 11-101
|
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
|
K POTASSIUM ION × 4
HEZ HEXANE-1,6-DIOL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;3.5-4.0M 1,6-hexanediol, 100mM MES , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.65 Å
R-free 0.181
|
|
4HZ3
MthK pore crystallized in presence of TBSb
Deposited 2012-11-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
11–101(91 aa)
Fragment:unp residues 11-101
Chain B
11–101(91 aa)
Fragment:unp residues 11-101
Chain C
11–101(91 aa)
Fragment:unp residues 11-101
Chain D
11–101(91 aa)
Fragment:unp residues 11-101
|
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
|
K POTASSIUM ION × 4
HEZ HEXANE-1,6-DIOL × 12
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;3.5 4.0M 1,6-hexanediol, 100mM MES, 10mM TBSb , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.70 Å
R-free 0.192
|
|
4HZ3
MthK pore crystallized in presence of TBSb
Deposited 2012-11-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain E
11–101(91 aa)
Fragment:unp residues 11-101
Chain F
11–101(91 aa)
Fragment:unp residues 11-101
Chain G
11–101(91 aa)
Fragment:unp residues 11-101
Chain H
11–101(91 aa)
Fragment:unp residues 11-101
|
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
Mutation:S68H, V77C
|
K POTASSIUM ION × 4
HEZ HEXANE-1,6-DIOL × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;3.5 4.0M 1,6-hexanediol, 100mM MES, 10mM TBSb , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.70 Å
R-free 0.192
|
|
4L73
Ca2+-bound MthK RCK domain at 2.5 Angstrom
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain B
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Not recorded
|
CA CALCIUM ION × 5
NA SODIUM ION × 8
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;12% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 1 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.50 Å
R-free 0.226
|
|
4L74
Ca2+-bound MthK RCK domain at 1.9 Angstrom with single ligand
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain B
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Not recorded
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;6% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.2 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 1.84 Å
R-free 0.253
|
|
4L75
Ca2+-bound D184N mutant MthK RCK domain at 2.4 Angstrom
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain B
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Mutation:D184N
Mutation:D184N
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;7% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.3 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.39 Å
R-free 0.245
|
|
4L75
Ca2+-bound D184N mutant MthK RCK domain at 2.4 Angstrom
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain C
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain D
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Mutation:D184N
Mutation:D184N
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;7% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.3 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.39 Å
R-free 0.245
|
|
4L75
Ca2+-bound D184N mutant MthK RCK domain at 2.4 Angstrom
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain E
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain F
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Mutation:D184N
Mutation:D184N
|
CA CALCIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;7% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.3 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.39 Å
R-free 0.245
|
|
4L76
Ca2+-bound E212Q mutant MthK RCK domain
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain B
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Mutation:E212Q
Mutation:E212Q
|
CA CALCIUM ION × 4
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;8% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.2 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.99 Å
R-free 0.263
|
|
4L76
Ca2+-bound E212Q mutant MthK RCK domain
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain C
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain D
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Mutation:E212Q
Mutation:E212Q
|
CA CALCIUM ION × 5
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;8% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.2 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.99 Å
R-free 0.263
|
|
4L76
Ca2+-bound E212Q mutant MthK RCK domain
Deposited 2013-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain E
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
Chain F
107–336(230 aa)
Fragment:RCK domain (UNP residues 107-336)
|
Mutation:E212Q
Mutation:E212Q
|
CA CALCIUM ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 4.8;295 K;8% PEG4000, 1 M ammonium formate, 0.1 M sodium acetate, pH 4.8, 0.2 M calcium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K
|
Resolution 2.99 Å
R-free 0.263
|
|
4QE7
Open MthK pore structure soaked in 10 mM Ba2+/100 mM Na+
Deposited 2014-05-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
19–99(81 aa)
Fragment:UNP residues 19-99
|
Mutation:S68H, V77C
|
BA BARIUM ION × 12
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;3.0-3.5M 1,6-Hexandiol, 100mM Hepes, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.40 Å
R-free 0.265
|
|
4QE9
Open MthK pore structure soaked in 10 mM Ba2+/100 mM K+
Deposited 2014-05-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–100(83 aa)
Fragment:UNP residues 18-100
|
Mutation:S51H, V60C
|
K POTASSIUM ION × 24
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.5;298 K;3.0-3.5M 1,6-Hexandiol, 100mM HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 2.15 Å
R-free 0.257
|
|
4RO0
Crystal structure of MthK gating ring in a ligand-free form
Deposited 2014-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain B
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain C
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain D
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain a
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain b
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain c
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain d
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.4 M KCl, 0.1 M Tris and 20-25% PEGMME 350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 3.18 Å
R-free 0.301
|
|
4RO0
Crystal structure of MthK gating ring in a ligand-free form
Deposited 2014-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain E
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain F
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain G
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain H
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain e
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain f
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain g
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain h
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.4 M KCl, 0.1 M Tris and 20-25% PEGMME 350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 3.18 Å
R-free 0.301
|
|
4RO0
Crystal structure of MthK gating ring in a ligand-free form
Deposited 2014-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain I
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain J
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain K
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain L
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain i
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain j
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain k
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain l
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.4 M KCl, 0.1 M Tris and 20-25% PEGMME 350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 3.18 Å
R-free 0.301
|
|
4RO0
Crystal structure of MthK gating ring in a ligand-free form
Deposited 2014-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain M
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain N
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain O
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain P
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain m
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain n
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain o
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain p
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.4 M KCl, 0.1 M Tris and 20-25% PEGMME 350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 3.18 Å
R-free 0.301
|
|
4RO0
Crystal structure of MthK gating ring in a ligand-free form
Deposited 2014-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain Q
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain R
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain S
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain T
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain q
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain r
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain s
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
Chain t
107–336(230 aa)
Fragment:MthK RCK, UNP residues 107-336
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8.5;293 K;0.4 M KCl, 0.1 M Tris and 20-25% PEGMME 350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 3.18 Å
R-free 0.301
|
|
5BKI
Blocker-free closed MthK channel in nanodisc
Deposited 2021-03-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CD CADMIUM ION × 12
PGW (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate × 4
K POTASSIUM ION × 5
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å
|
|
5BKJ
TPeA-bound closed MthK channel in nanodisc
Deposited 2021-03-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
PGW (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate × 4
K POTASSIUM ION × 2
YQ1 1-(tripentyl-$l^{4}-azanyl)pentane × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
5BKK
bbTBA-bound closed MthK channel in nanodisc
Deposited 2021-03-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
PGW (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate × 2
K POTASSIUM ION × 3
YQ4 (~{R})-phenyl-[4-[(tributyl-$l^{4}-azanyl)methyl]phenyl]methanol × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
6OLY
Full-length MthK channel at 3.1 angstrom resolution
Deposited 2019-04-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
|
Mutation:M107I
Mutation:M107I
Mutation:M107I
Mutation:M107I
|
CA CALCIUM ION × 24
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;300 K;28% PEG350-MME, 0.1M MES pH 6.5, 0.2 M CaCl2
|
Resolution 3.11 Å
R-free 0.275
|
|
6U5N
Calcium-bound MthK gating ring state 2
Deposited 2019-08-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CA CALCIUM ION × 24
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE;blotting for 2 seconds (blot force 0)
|
Resolution 3.20 Å
|
|
6U5P
Calcium-bound MthK gating ring state 1
Deposited 2019-08-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CA CALCIUM ION × 24
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE;blotting for 2 seconds (blot force 0)
|
Resolution 3.30 Å
|
|
6U5R
Calcium-bound MthK closed state
Deposited 2019-08-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CA CALCIUM ION × 8
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE;blotting for 2 seconds (blot force 0)
|
Resolution 3.60 Å
|
|
6U68
Calcium-bound MthK open-inactivated state 1
Deposited 2019-08-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE;blotting for 2 s (blot force 0)
|
Resolution 4.50 Å
|
|
6U6D
MthK closed state with EDTA
Deposited 2019-08-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
K POTASSIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE;blotting for 2 s (blot force 0)
|
Resolution 3.60 Å
|
|
6U6E
Calcium-bound MthK open-inactivated state 2
Deposited 2019-08-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.30 Å
|
|
6U6H
Calcium-bound MthK open-inactivated state 3
Deposited 2019-08-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.00 Å
|
|
6U9P
Wild-type MthK pore in ~150 mM K+
Deposited 2019-09-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:UNP residues 18-99
|
Not recorded
|
K POTASSIUM ION × 20
HEZ HEXANE-1,6-DIOL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;1:1 protein (in 100 mM potassium chloride, 10 mM MOPS-KOH, pH 8.0) + 3.5-4.0 M 1,6-hexanediol, 100 mM MES-KOH, pH 6.75
|
Resolution 1.65 Å
R-free 0.207
|
|
6U9T
Wild-type MthK pore in 50 mM K+
Deposited 2019-09-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:UNP residues 18-99
|
Not recorded
|
K POTASSIUM ION × 20
HEZ HEXANE-1,6-DIOL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;1:1 protein (in 100 mM sodium chloride, 1 mM potassium chloride, 10 mM MOPS, pH 8.0) + 3.5-4.0 M 1,6-hexanediol, 100 mM MES-NaOH, pH 6.75
|
Resolution 1.55 Å
R-free 0.210
|
|
6U9Y
Wild-type MthK pore in 11 mM K+
Deposited 2019-09-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:UNP residues 18-99
|
Mutation:UNP residues 18-99
|
K POTASSIUM ION × 20
HEZ HEXANE-1,6-DIOL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;1:1 protein (in 100 mM sodium chloride, 1 mM potassium chloride, 10 mM MOPS, pH 8.0) + 3.5-4.0 M 1,6-hexanediol, 100 mM MES-NaOH, 10 mM potassium chloride
|
Resolution 1.80 Å
R-free 0.217
|
|
6U9Z
Wild-type MthK pore in 6 mM K+
Deposited 2019-09-09
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
18–99(82 aa)
Fragment:UNP residues 18-99
|
Not recorded
|
K POTASSIUM ION × 20
HEZ HEXANE-1,6-DIOL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 8;293 K;protein (in 100 mM sodium chloride, 1 mM potassium chloride, 10 mM MOPS) + 3.5-4.0 M 1,6-hexanediol, 100 mM MES-NaOH, pH 6.75, 5 mM potassium chloride
|
Resolution 1.95 Å
R-free 0.226
|
|
6UWN
MthK N-terminal truncation RCK domain state 1 bound with calcium
Deposited 2019-11-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CA CALCIUM ION × 24
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
6UX4
MthK N-terminal truncation RCK domain state 2 bound with calcium
Deposited 2019-11-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
CA CALCIUM ION × 24
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
6UX7
MthK N-terminal truncation state 1 bound with calcium
Deposited 2019-11-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.70 Å
|
|
6UXA
MthK N-terminal truncation state 2 bound with calcium
Deposited 2019-11-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.50 Å
|
|
6UXB
MthK N-terminal truncation state 3 bound with calcium
Deposited 2019-11-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.90 Å
|
|
8DJB
MthK-A90L mutant in closed state with 0 Ca2+
Deposited 2022-06-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
K POTASSIUM ION × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE;BLOTTING FOR 2 S (BLOT FORCE 1)
|
Resolution 3.18 Å
|
|
8FZ7
TpeA bound closed MthK-A88F mutant in nanodisc
Deposited 2023-01-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
PGW (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate × 4
YQ1 1-(tripentyl-$l^{4}-azanyl)pentane × 1
K POTASSIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5
cryo-EM vitrification conditions
Cryogen ETHANE;BLOTTING FOR 2 S (BLOT FORCE 0)
|
Resolution 2.88 Å
|
|
9Z2M
Ca2+-bound MthK WT in lipid nanodiscs composed of 14:1PC (75%) and POPG (25%)
Deposited 2025-11-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5;20 mM HEPES-KOH pH 8.5
100 mM KCl
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
9Z2V
Ca2+-bound MthK WT in lipid nanodiscs composed of 22:1PC (75%) and POPG (25%)
Deposited 2025-11-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 8
PDB declaration: octameric
|
Chain A
1–336(336 aa)
Chain B
1–336(336 aa)
Chain C
1–336(336 aa)
Chain D
1–336(336 aa)
Chain E
1–336(336 aa)
Chain F
1–336(336 aa)
Chain G
1–336(336 aa)
Chain H
1–336(336 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8.5;20 mM HEPES-KOH pH 8.5
100 mM KCl
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|