|
2AE7
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with Pentasaccharide
Deposited 2005-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.246
|
|
2AE7
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with Pentasaccharide
Deposited 2005-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 6
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 5
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.246
|
|
2AE7
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with Pentasaccharide
Deposited 2005-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
DIO 1,4-DIETHYLENE DIOXIDE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.246
|
|
2AE7
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with Pentasaccharide
Deposited 2005-07-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
Mutation:M340H, C338T, R337T
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 3
SO4 SULFATE ION × 14
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 3
GOL GLYCEROL × 7
DIO 1,4-DIETHYLENE DIOXIDE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.246
|
|
2AEC
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with GlcNAc-beta1,2-Man-alpha1,6-Man-beta-OR
Deposited 2005-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.239
|
|
2AEC
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with GlcNAc-beta1,2-Man-alpha1,6-Man-beta-OR
Deposited 2005-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 6
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.239
|
|
2AEC
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in Complex with GlcNAc-beta1,2-Man-alpha1,6-Man-beta-OR
Deposited 2005-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
DIO 1,4-DIETHYLENE DIOXIDE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.239
|
|
2AES
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with GlcNAc-beta1,2-Man-alpha1,3-Man-beta-OR
Deposited 2005-07-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.232
|
|
2AES
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with GlcNAc-beta1,2-Man-alpha1,3-Man-beta-OR
Deposited 2005-07-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 6
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.232
|
|
2AES
Crystal Structure of Human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with GlcNAc-beta1,2-Man-alpha1,3-Man-beta-OR
Deposited 2005-07-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 3
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
DIO 1,4-DIETHYLENE DIOXIDE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.232
|
|
2AGD
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I(M340H-B4Gal-T1) in Complex with GlcNAc-beta1,4-Man-alpha1,3-Man-beta-OR
Deposited 2005-07-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 1.90 Å
R-free 0.228
|
|
2AGD
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I(M340H-B4Gal-T1) in Complex with GlcNAc-beta1,4-Man-alpha1,3-Man-beta-OR
Deposited 2005-07-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 7
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 1.90 Å
R-free 0.228
|
|
2AGD
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I(M340H-B4Gal-T1) in Complex with GlcNAc-beta1,4-Man-alpha1,3-Man-beta-OR
Deposited 2005-07-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 5
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
DIO 1,4-DIETHYLENE DIOXIDE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 1.90 Å
R-free 0.228
|
|
2AH9
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with Chitotriose
Deposited 2005-07-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 2
SO4 SULFATE ION × 4
DIO 1,4-DIETHYLENE DIOXIDE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.224
|
|
2AH9
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with Chitotriose
Deposited 2005-07-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 4
SO4 SULFATE ION × 7
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.224
|
|
2AH9
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with Chitotriose
Deposited 2005-07-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 5
DIO 1,4-DIETHYLENE DIOXIDE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.224
|
|
2AH9
Crystal Structure of Human M340H-Beta-1,4-Galactosyltransferase-I (M340H-B4Gal-T1) in Complex with Chitotriose
Deposited 2005-07-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
Chain B
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
Chain C
125–397(273 aa)
Fragment:Catalytic domain, Residues 126-398
|
Mutation:M340H, C338T, R337T
Mutation:M340H, C338T, R337T
Mutation:M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
GOL GLYCEROL × 7
SO4 SULFATE ION × 16
DIO 1,4-DIETHYLENE DIOXIDE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;mes, ammonium sulfate, dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.00 Å
R-free 0.224
|
|
2FY7
Crystal structure of the catalytic domain of the human beta1,4-galactosyltransferase mutant M339H in apo form
Deposited 2006-02-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:catalytic domain, residues 125-397
|
Mutation:R337T, C338T, M340H
|
PGE TRIETHYLENE GLYCOL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.6;298 K;50 mM sodium citrate buffer, 6% PEG 4000, pH 5.6, VAPOR DIFFUSION, temperature 298K
|
Resolution 1.70 Å
R-free 0.222
|
|
2FYA
Crystal structure of the catalytic domain of the human beta1, 4-galactosyltransferase mutant M339H complex with manganese
Deposited 2006-02-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:catalytic domain, residues 125-397
|
Mutation:R337T, C338T, M340H
|
MN MANGANESE (II) ION × 1
PGE TRIETHYLENE GLYCOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.6;298 K;10 mg/ml protein solution, 5 mM manganese chloride, 50 mM sodium citrate buffer, 6% PEG 4000, pH 5.6, VAPOR DIFFUSION, temperature 298K
|
Resolution 1.90 Å
R-free 0.226
|
|
2FYB
Crystal structure of the catalytic domain of the human beta1,4-galactosyltransferase mutant M339H in complex with Mn and UDP-galactose in open conformation
Deposited 2006-02-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
125–397(273 aa)
Fragment:catalytic domain, residues 125-397
|
Mutation:R337T, C338T, M340H
|
MN MANGANESE (II) ION × 1
UDP URIDINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.6;298 K;10 mg/ml protein solution, 5mM manganese chloride, 5mM UDP-galactose, 50 mM sodium citrate, 6% PEG 4000, pH 5.6, VAPOR DIFFUSION, temperature 298K
|
Resolution 1.90 Å
R-free 0.216
|
|
3EE5
Crystal structure of human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in complex with GLCNAC-Beta1,3-Gal-Beta-Naphthalenemethanol
Deposited 2008-09-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain of Beta-1,4-Galactosyltransferase
|
Mutation:d126, M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
2NA naphthalen-2-ylmethanol × 1
SO4 SULFATE ION × 5
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 6.5;298 K;MES, AMMONIUM SULFATE, DIOXANE, pH 6.5, EVAPORATION, temperature 298K
|
Resolution 2.20 Å
R-free 0.240
|
|
3EE5
Crystal structure of human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in complex with GLCNAC-Beta1,3-Gal-Beta-Naphthalenemethanol
Deposited 2008-09-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:Catalytic domain of Beta-1,4-Galactosyltransferase
|
Mutation:d126, M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
2NA naphthalen-2-ylmethanol × 1
SO4 SULFATE ION × 7
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 6.5;298 K;MES, AMMONIUM SULFATE, DIOXANE, pH 6.5, EVAPORATION, temperature 298K
|
Resolution 2.20 Å
R-free 0.240
|
|
3EE5
Crystal structure of human M340H-Beta1,4-Galactosyltransferase-I (M340H-B4GAL-T1) in complex with GLCNAC-Beta1,3-Gal-Beta-Naphthalenemethanol
Deposited 2008-09-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:Catalytic domain of Beta-1,4-Galactosyltransferase
|
Mutation:d126, M340H, C338T, R337T
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
2NA naphthalen-2-ylmethanol × 1
SO4 SULFATE ION × 2
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
DIO 1,4-DIETHYLENE DIOXIDE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
EVAPORATION;pH 6.5;298 K;MES, AMMONIUM SULFATE, DIOXANE, pH 6.5, EVAPORATION, temperature 298K
|
Resolution 2.20 Å
R-free 0.240
|
|
4EE3
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 8
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.240
|
|
4EE3
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 6
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.240
|
|
4EE3
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.240
|
|
4EE3
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 6
PDB declaration: hexameric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
Chain B
126–398(273 aa)
Fragment:Catalytic domain
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 6
MN MANGANESE (II) ION × 6
SO4 SULFATE ION × 36
GOL GLYCEROL × 6
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.240
|
|
4EE3
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
Chain B
126–398(273 aa)
Fragment:Catalytic domain
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDH 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
SO4 SULFATE ION × 18
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.240
|
|
4EE4
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with tetrasaccharide from Lacto-N-neohexose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 7
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.232
|
|
4EE4
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with tetrasaccharide from Lacto-N-neohexose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 11
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.232
|
|
4EE4
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with tetrasaccharide from Lacto-N-neohexose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.232
|
|
4EE4
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with tetrasaccharide from Lacto-N-neohexose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 6
PDB declaration: hexameric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
Chain B
126–398(273 aa)
Fragment:Catalytic domain
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 6
MN MANGANESE (II) ION × 6
SO4 SULFATE ION × 44
GOL GLYCEROL × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.232
|
|
4EE4
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with tetrasaccharide from Lacto-N-neohexose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
Chain B
126–398(273 aa)
Fragment:Catalytic domain
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
SO4 SULFATE ION × 22
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 1.95 Å
R-free 0.232
|
|
4EE5
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with trisaccharide from Lacto-N-neotetraose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.250
|
|
4EE5
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with trisaccharide from Lacto-N-neotetraose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 2
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.250
|
|
4EE5
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with trisaccharide from Lacto-N-neotetraose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.250
|
|
4EE5
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with trisaccharide from Lacto-N-neotetraose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 6
PDB declaration: hexameric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
Chain B
126–398(273 aa)
Fragment:catalytic domain
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 6
MN MANGANESE (II) ION × 6
GOL GLYCEROL × 8
SO4 SULFATE ION × 22
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.250
|
|
4EE5
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with trisaccharide from Lacto-N-neotetraose
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
Chain B
126–398(273 aa)
Fragment:catalytic domain
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
GOL GLYCEROL × 4
SO4 SULFATE ION × 11
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.250
|
|
4EEA
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta1,4-Glc-BETA
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 6
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 MM Mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.240
|
|
4EEA
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta1,4-Glc-BETA
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 2
SO4 SULFATE ION × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 MM Mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.240
|
|
4EEA
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta1,4-Glc-BETA
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 6
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 MM Mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.240
|
|
4EEA
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta1,4-Glc-BETA
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 6
PDB declaration: hexameric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
Chain B
126–398(273 aa)
Fragment:catalytic domain
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 6
MN MANGANESE (II) ION × 6
GOL GLYCEROL × 8
SO4 SULFATE ION × 40
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 MM Mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.240
|
|
4EEA
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta1,4-Glc-BETA
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
Chain B
126–398(273 aa)
Fragment:catalytic domain
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
GOL GLYCEROL × 4
SO4 SULFATE ION × 20
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 MM Mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.00 Å
R-free 0.240
|
|
4EEG
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M Ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.244
|
|
4EEG
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 2
SO4 SULFATE ION × 5
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M Ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.244
|
|
4EEG
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
GOL GLYCEROL × 1
SO4 SULFATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M Ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.244
|
|
4EEG
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
Chain B
126–398(273 aa)
Fragment:catalytic domain
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
GOL GLYCEROL × 4
SO4 SULFATE ION × 10
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M Ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.244
|
|
4EEM
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-MAN-ALPHA-methyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
GOL GLYCEROL × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.236
|
|
4EEM
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-MAN-ALPHA-methyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 7
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.236
|
|
4EEM
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-MAN-ALPHA-methyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 3
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.236
|
|
4EEM
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-MAN-ALPHA-methyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:Catalytic domain
Chain B
126–398(273 aa)
Fragment:Catalytic domain
Chain C
126–398(273 aa)
Fragment:Catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
SO4 SULFATE ION × 14
GOL GLYCEROL × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM Mes buffer, 1.6 M ammonium sulfate, 2% Dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.20 Å
R-free 0.236
|
|
4EEO
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-GlcNAc-ALPHA-benzyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 4
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.255
|
|
4EEO
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-GlcNAc-ALPHA-benzyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 5
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.255
|
|
4EEO
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-GlcNAc-ALPHA-benzyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Other combination
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 1
MN MANGANESE (II) ION × 1
SO4 SULFATE ION × 2
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.255
|
|
4EEO
Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-GlcNAc-ALPHA-benzyl
Deposited 2012-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Other combination
Homooligomer;Protein × 3
PDB declaration: trimeric
|
Chain A
126–398(273 aa)
Fragment:catalytic domain
Chain B
126–398(273 aa)
Fragment:catalytic domain
Chain C
126–398(273 aa)
Fragment:catalytic domain
|
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
Mutation:R337T, C338T, M340H
|
UDP URIDINE-5'-DIPHOSPHATE × 3
MN MANGANESE (II) ION × 3
SO4 SULFATE ION × 11
GOL GLYCEROL × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;277 K;100 mM mes buffer, 1.6 M ammonium sulfate, 2% dioxane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
|
Resolution 2.30 Å
R-free 0.255
|
|
6FWT
Crystal structure of human wild type beta-1,4-galactosyltransferase-1 (B4GalT1) in apo-open monomeric form
Deposited 2018-03-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
122–398(277 aa)
|
Not recorded
|
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2 M Potassium Nitrate, 20% (w/v) PEG 3350
|
Resolution 1.84 Å
R-free 0.218
|
|
6FWU
Crystal structure of human wild type beta-1,4-galactosyltransferase-1 (B4GalT1) in apo-closed dimeric form
Deposited 2018-03-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
126–398(273 aa)
Chain B
126–398(273 aa)
|
Not recorded
|
NO3 NITRATE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;0.2 M Potassium Nitrate, 20% (w/v) PEG 3350
|
Resolution 2.35 Å
R-free 0.256
|