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5kwl

expanded poliovirus in complex with VHH 10E

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

VP1

OrganismNot specified

UniProt P03300

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 240 VHH 10E × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 4 VHH 10E × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 20 VHH 10E × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 24 VHH 10E × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 4 VHH 10E × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1l1n 1l1n 1ra6 1ra7 1raj 1rdr 1tql 2bbp 2ijf 2ily 2ilz 2im0

32 assemblies; showing the first 12

Homodimer
1ng7 2ijd 2ijd

3 assemblies

Homotetramer
1hxs 1hxs 2plv 2plv 5z3q

5 assemblies

Other homooligomers
1hxs 1hxs 1hxs 1hxs 1pov 1pov 1pov 1pov 1pov 1pov 1xyr 1xyr

30 assemblies; showing the first 12

Heteromeric or nucleic-acid complex
1al2 1al2 1al2 1al2 1al2 1al2 1ar6 1ar6 1ar6 1ar6 1ar6 1ar6

181 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name POLG_POL1M
Isoform —
PDB entities 1, 2, 3
Chains and sequence ranges Author chain 1； PDBConstruct 1–209； UniProt 650–858 Author chain 2； PDBConstruct 1–268； UniProt 70–337 Author chain 3； PDBConstruct 1–230； UniProt 342–571

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5kwl
Deposition date deposition_date2016-07-18
Structure title titleexpanded poliovirus in complex with VHH 10E
Keywords keywordspoliovirus, VHH, nanobody, 80S, expanded, single domain antibody, VIRUS-Immune System complex; VIRUS/Immune System
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5kwl__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5kwl__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5kwl__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)142.70 Å
Total Rg142.70 Å
Atom count367440
Residues47100
Excluded volume6526200 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5kwl__assembly_1__model_1 240-meric （240） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 5kwl__assembly_2__model_1 tetrameric （4） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 5kwl__assembly_3__model_1 eicosameric （20） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 5kwl__assembly_4__model_1 24-meric （24） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 5kwl__assembly_5__model_1 tetrameric （4） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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7. Citations (1)