|
2XRP
Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules
Deposited 2010-09-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 9
PDB declaration: nonameric
|
Chain A
1–445(445 aa)
Chain C
1–445(445 aa)
Chain E
1–445(445 aa)
Chain G
1–445(445 aa)
|
Not recorded
|
GDP GUANOSINE-5'-DIPHOSPHATE × 4
GTP GUANOSINE-5'-TRIPHOSPHATE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
80MM PIPES, 1MM EGTA, 3MM MGCL2, 1MM TCEP, 0.5MM GTP;pH 6.8;80MM PIPES, 1MM EGTA, 3MM MGCL2, 1MM TCEP, 0.5MM GTP
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 8.20 Å
|
|
3DU7
Tubulin-colchicine-phomopsin A: Stathmin-like domain complex
Deposited 2008-07-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
CN2 2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE × 2
HOS Phomopsin A × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;291 K;PEG, PIPES BUFFER. The crystal of tubulin-colchicine:RB3-SLD complex was soaked with a 0.7mM Phomopsin A solution for 24 hours., pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 4.10 Å
R-free 0.265
|
|
3E22
Tubulin-colchicine-soblidotin: Stathmin-like domain complex
Deposited 2008-08-05
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 2
TZT SOBLIDOTIN × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7;291 K;PEG, PIPES buffer, The crystal of tubulin-colchicine:RB3-SLD complex was soaked with a 2.0mM soblidotin solution for 24 hours., pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 291K
|
Resolution 3.80 Å
R-free 0.295
|
|
3J2U
Kinesin-13 KLP10A HD in complex with CS-tubulin and a microtubule
Deposited 2013-01-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 210
PDB declaration: 210-meric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 10.80 Å
|
|
3J2U
Kinesin-13 KLP10A HD in complex with CS-tubulin and a microtubule
Deposited 2013-01-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 10.80 Å
|
|
3J2U
Kinesin-13 KLP10A HD in complex with CS-tubulin and a microtubule
Deposited 2013-01-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 10.80 Å
|
|
4AQV
Model of human kinesin-5 motor domain (3HQD) and mammalian tubulin heterodimer (1JFF) docked into the 9.7-angstrom cryo-EM map of microtubule-bound kinesin-5 motor domain in the AMPPPNP state.
Deposited 2012-04-19
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
80 MM PIPES, 5 MM MGCL2, 1 MM EGTA, 5MM AMPPNP;pH 6.8;80 MM PIPES, 5 MM MGCL2, 1 MM EGTA, 5MM AMPPNP
cryo-EM vitrification conditions
Cryogen ETHANE;CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT MARK I, METHOD- CHAMBER AT 24 DEGREES C, BLOT 2.5 SEC,
|
Resolution 9.70 Å
|
|
4AQW
Model of human kinesin-5 motor domain (1II6, 3HQD) and mammalian tubulin heterodimer (1JFF) docked into the 9.5-angstrom cryo-EM map of microtubule-bound kinesin-5 motor domain in the rigor state.
Deposited 2012-04-19
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
80 MM PIPES, 5 MM MGCL2, 1 MM EGTA, 1 U/ML APYRASE;pH 6.8;80 MM PIPES, 5 MM MGCL2, 1 MM EGTA, 1 U/ML APYRASE
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 9.50 Å
|
|
4ATU
Human doublecortin N-DC repeat plus linker, and tubulin (2XRP) docked into an 8A cryo-EM map of doublecortin-stabilised microtubules reconstructed in absence of kinesin
Deposited 2012-05-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 9
PDB declaration: nonameric
|
Chain A
1–445(445 aa)
Chain C
1–445(445 aa)
Chain E
1–445(445 aa)
Chain G
1–445(445 aa)
|
Not recorded
|
GDP GUANOSINE-5'-DIPHOSPHATE × 4
GTP GUANOSINE-5'-TRIPHOSPHATE × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
20MM PIPES, 1MM EGTA, 3MM MGCL2, 1MM TCEP, 0.5MM GTP;pH 6.8;20MM PIPES, 1MM EGTA, 3MM MGCL2, 1MM TCEP, 0.5MM GTP
cryo-EM vitrification conditions
Cryogen ETHANE;CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT
|
Resolution 8.30 Å
|
|
4ATX
Rigor kinesin motor domain with an ordered neck-linker, docked on tubulin dimer, modelled into the 8A cryo-EM map of doublecortin- microtubules decorated with kinesin
Deposited 2012-05-10
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain A
1–445(445 aa)
|
Not recorded
|
GDP GUANOSINE-5'-DIPHOSPHATE × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
20MM PIPES, 1MM EGTA, 3MM MGCL2, 1MM TCEP, 0.5MM GTP;pH 6.8;20MM PIPES, 1MM EGTA, 3MM MGCL2, 1MM TCEP, 0.5MM GTP
cryo-EM vitrification conditions
Cryogen ETHANE;CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT
|
Resolution 8.20 Å
|
|
4CK5
Pseudo-atomic model of microtubule-bound human kinesin-5 motor domain in the ADP state, based on cryo-electron microscopy experiment.
Deposited 2013-12-30
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
MG MAGNESIUM ION × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
20 MM PIPES, 5 MM MGCL2, 1 MM EGTA, 10 MM ADP;pH 6.8;20 MM PIPES, 5 MM MGCL2, 1 MM EGTA, 10 MM ADP
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 10.00 Å
|
|
4CK6
Pseudo-atomic model of microtubule-bound human kinesin-5 motor domain in the ADP.AlFx state, based on cryo-electron microscopy experiment.
Deposited 2013-12-30
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
AF3 ALUMINUM FLUORIDE × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
80 MM PIPES 5 MM MGCL2 1 MM TCEP 1 MM EGTA;pH 6.8;80 MM PIPES 5 MM MGCL2 1 MM TCEP 1 MM EGTA
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 9.20 Å
|
|
4CK7
Pseudo-atomic model of microtubule-bound human kinesin-5 motor domain in presence of adp.alfx (NECK-LINKER IN ITS DISCONNECTED CONFORMATION, based on cryo-electron microscopy experiment
Deposited 2013-12-30
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
AF3 ALUMINUM FLUORIDE × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
80 MM PIPES 5 MM MGCL2 1 MM EGTA 1 MM TCEP;pH 6.8;80 MM PIPES 5 MM MGCL2 1 MM EGTA 1 MM TCEP
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 9.20 Å
|
|
4I4T
Crystal structure of tubulin-RB3-TTL-Zampanolide complex
Deposited 2012-11-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 6
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
GOL GLYCEROL × 7
GDP GUANOSINE-5'-DIPHOSPHATE × 2
TYR TYROSINE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ZPN (2Z,4E)-N-[(S)-[(1S,2E,5S,8E,10Z,17S)-3,11-dimethyl-19-methylidene-7,13-dioxo-6,21-dioxabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl](hydroxy)methyl]hexa-2,4-dienamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;3% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 1.80 Å
R-free 0.204
|
|
4I50
Crystal structure of tubulin-stathmin-TTL-Epothilone A complex
Deposited 2012-11-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 6
CA CALCIUM ION × 6
CL CHLORIDE ION × 1
GOL GLYCEROL × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
EP EPOTHILONE A × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;3% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.30 Å
R-free 0.246
|
|
4I55
Crystal structure of tubulin-stathmin-TTL complex
Deposited 2012-11-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 7
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;3% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole , pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.20 Å
R-free 0.208
|
|
4IHJ
Crystal structure of tubulin-stathmin-TTL-ADP complex
Deposited 2012-12-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 7
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
ADP ADENOSINE-5'-DIPHOSPHATE × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;4-10% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.00 Å
R-free 0.217
|
|
4IIJ
Crystal structure of tubulin-stathmin-TTL-apo complex
Deposited 2012-12-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;4-10% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole , pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.60 Å
R-free 0.235
|
|
4O2A
Tubulin-BAL27862 complex
Deposited 2013-12-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
GOL GLYCEROL × 1
IMD IMIDAZOLE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
2RR 3-[(4-{1-[2-(4-aminophenyl)-2-oxoethyl]-1H-benzimidazol-2-yl}-1,2,5-oxadiazol-3-yl)amino]propanenitrile × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6.7;293 K;6% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole , pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.50 Å
R-free 0.232
|
|
4O2B
Tubulin-Colchicine complex
Deposited 2013-12-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 13
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
PEG DI(HYDROXYETHYL)ETHER × 2
IMD IMIDAZOLE × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6.7;293 K;6% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole , pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.30 Å
R-free 0.213
|
|
4O4H
Tubulin-Laulimalide complex
Deposited 2013-12-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
LLM Laulimalide × 1
GOL GLYCEROL × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.10 Å
R-free 0.224
|
|
4O4I
Tubulin-Laulimalide-Epothilone A complex
Deposited 2013-12-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 6
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
EP EPOTHILONE A × 2
LLM Laulimalide × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.40 Å
R-free 0.214
|
|
4O4J
Tubulin-Peloruside A complex
Deposited 2013-12-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 1
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
POU Peloruside A × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.20 Å
R-free 0.239
|
|
4O4L
Tubulin-Peloruside A-Epothilone A complex
Deposited 2013-12-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
POU Peloruside A × 2
EP EPOTHILONE A × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.20 Å
R-free 0.224
|
|
4TUY
Tubulin-Rhizoxin complex
Deposited 2014-06-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
36L (1R,2R,3E,5R,7R,8S,10S,13E,16R)-8-hydroxy-10-[(2S,3R,4E,6E,8E)-3-methoxy-4,8-dimethyl-9-(2-methyl-1,3-oxazol-4-yl)nona-4,6,8-trien-2-yl]-2,7-dimethyl-6,11,19-trioxatricyclo[14.3.1.0~5,7~]icosa-3,13-diene-12,18-dione × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.10 Å
R-free 0.217
|
|
4TV8
Tubulin-Maytansine complex
Deposited 2014-06-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: Hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 4
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
3GT (3beta,4beta,5beta,10beta,11E,13E)-maytansine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.10 Å
R-free 0.218
|
|
4TV9
Tubulin-PM060184 complex
Deposited 2014-06-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: Hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
3H4 (1Z,4S,6Z)-1-[(N-{(2Z,4Z,6E,8S)-8-[(2S)-5-methoxy-6-oxo-3,6-dihydro-2H-pyran-2-yl]-6-methylnona-2,4,6-trienoyl}-3-methy l-L-valyl)amino]octa-1,6-dien-4-yl carbamate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.00 Å
R-free 0.208
|
|
4UXO
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 10 U/ML APYRASE;pH 6.8;20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 10 U/ML APYRASE
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 6.30 Å
|
|
4UXP
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 10 U/ML APYRASE;pH 6.8;20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 10 U/ML APYRASE
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 6.30 Å
|
|
4UXR
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ALF TETRAFLUOROALUMINATE ION × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 7.00 Å
|
|
4UXS
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 2MM ADP;pH 6.8;20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 2MM ADP
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 7.00 Å
|
|
4UXT
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 10 U/ML APYRASE;pH 6.8;20MM PIPES, 2MM MGCL2, 1MM EGTA, 2MM DTT, 10 U/ML APYRASE
cryo-EM vitrification conditions
Cryogen ETHANE;LIQUID ETHANE
|
Resolution 7.40 Å
|
|
4UXY
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.50 Å
|
|
4UY0
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Deposited 2014-08-27
|
Different construct
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
2–427(426 aa)
Fragment:RESIDUES 2-427
|
Not recorded
|
ZN ZINC ION × 1
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ADP ADENOSINE-5'-DIPHOSPHATE × 1
ALF TETRAFLUOROALUMINATE ION × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 7.70 Å
|
|
4YJ2
Crystal structure of tubulin bound to MI-181
Deposited 2015-03-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 3
GOL GLYCEROL × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
4ED 5,6-dimethyl-2-[(E)-2-(pyridin-3-yl)ethenyl]-1,3-benzothiazole × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
IMD IMIDAZOLE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;298 K;100 mM MES/imidazole, 30 mM CaCl2, 30 mM MgCl2, 6% (w/v) PEG 4000, 7% glycerol CRYO Paratone-N oil
|
Resolution 2.60 Å
R-free 0.231
|
|
4YJ3
Crystal structure of tubulin bound to compound 2
Deposited 2015-03-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 4
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
4EE 6-(4-ethoxyphenyl)-3-(2-methoxyphenyl)-7H-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazine × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
IMD IMIDAZOLE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;298 K;100 mM MES/imidazole, 30 mM CaCl2, 30 mM MgCl2, 6% (w/v) PEG 4000, 4% glycerol CRYO 16% glycerol
|
Resolution 3.75 Å
R-free 0.279
|
|
5EIB
Crystal structure of CPAP PN2-3 C-terminal loop-helix in complex with DARPin-tubulin
Deposited 2015-10-29
|
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.8;282 K;potassium sodium tartrate, PEG 3000
|
Resolution 2.10 Å
R-free 0.222
|
|
5EZY
Crystal structure of T2R-TTL-taccalonolide AJ complex
Deposited 2015-11-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
TAJ taccalonolide AJ × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% polyethylene glycol 4000, 8% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.05 Å
R-free 0.208
|
|
5GON
Structures of a beta-lactam bridged analogue in complex with tubulin
Deposited 2016-07-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Fragment:UNP RESIDUES 1-431
Chain D
1–431(431 aa)
Fragment:UNP RESIDUES 1-431
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 12
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
6ZR (3R,4R)-4-(4-methoxy-3-oxidanyl-phenyl)-3-methyl-1-(3,4,5-trimethoxyphenyl)azetidin-2-one × 1
IMD IMIDAZOLE × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% polyethylene glycol 4000, 8% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.48 Å
R-free 0.257
|
|
5H74
Crystal structure of T2R-TTL-14b complex
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
7LG (2~{S},4~{R})-4-[[2-[(1~{R},3~{R})-1-acetyloxy-3-[hexyl-[(2~{S},3~{S})-3-methyl-2-[[(2~{R})-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-4-methyl-pentyl]-1,3-thiazol-4-yl]carbonylamino]-5-(4-fluorophenyl)-2-methyl-pentanoic acid × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% PEG, 5% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.60 Å
R-free 0.248
|
|
5H7O
Crystal structure of DJ-101 in complex with tubulin protein
Deposited 2016-11-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
7Q7 2-(1H-indol-4-yl)-4-(3,4,5-trimethoxyphenyl)-1H-imidazo[4,5-c]pyridine × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;6% poly(ethylene glycol) 4000, 8% glycerol,
0.1 M Mes, 30 mM CaCl2 and 30 mM MgCl2 (pH 6.7)
|
Resolution 2.80 Å
R-free 0.256
|
|
5HNW
Structural basis of backwards motion in kinesin-14: minus-end directed nKn664 in the AMPPNP state
Deposited 2016-01-19
|
Different construct
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
2–445(444 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.60 Å
|
|
5HNX
Structural basis of backwards motion in kinesin-14: minus-end directed nKn664 in the nucleotide-free state
Deposited 2016-01-19
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.60 Å
|
|
5HNY
Structural basis of backwards motion in kinesin-14: plus-end directed nKn669 in the AMPPNP state
Deposited 2016-01-19
|
Different construct
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
2–427(426 aa)
Fragment:UNP residues 2-427
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.30 Å
|
|
5HNZ
Structural basis of backwards motion in kinesin-14: plus-end directed nKn669 in the nucleotide-free state
Deposited 2016-01-19
|
Different ligand/ion
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.80 Å
|
|
5ITZ
Crystal structure of the SAC domain of CPAP in a complex with Tubulin and Darpin
Deposited 2016-03-17
|
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;20% PEG 550 mono methyl ether (MME) and 0.1 M MES, pH 6.5
|
Resolution 2.20 Å
R-free 0.217
|
|
5IYZ
Tubulin-MMAE complex
Deposited 2016-03-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
4Q5 N-methyl-L-valyl-N-[(3R,4S,5S)-1-{(2S)-2-[(1R,2R)-3-{[(1S,2R)-1-hydroxy-1-phenylpropan-2-yl]amino}-1-methoxy-2-methyl-3-oxopropyl]pyrrolidin-1-yl}-3-methoxy-5-methyl-1-oxoheptan-4-yl]-N-methyl-L-valinamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;5% PEG, 12% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 1.80 Å
R-free 0.202
|
|
5J2T
Tubulin-vinblastine complex
Deposited 2016-03-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 1
VLB (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% PEG, 12% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.20 Å
R-free 0.244
|
|
5J2U
Tubulin-MMAF complex
Deposited 2016-03-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 8
PDB declaration: octameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;5% PEG, 12% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.50 Å
R-free 0.250
|
|
5JH7
Tubulin-Eribulin complex
Deposited 2016-04-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 5
IMD IMIDAZOLE × 3
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
6K9 (1S,3S,6S,9S,12S,14R,16R,18S,20R,21R,22S,26R,29S,31R,32S,33R,35R,36S)-20-[(2S)-3-amino-2-hydroxypropyl]-21-methoxy-14-methyl-8,15-dimethylidene-2,19,30,34,37,39,40,41-octaoxanonacyclo[24.9.2.1~3,32~.1~3,33~.1~6,9~.1~12,16~.0~18,22~.0~29,36~.0~31,35~]hentetracontan-24-one (non-preferred name) × 2
03S methanesulfonic acid × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;3% PEG 4000, 4-6% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 100 MM MES/IMIDAZOLE, PH 6.7
|
Resolution 2.25 Å
R-free 0.220
|
|
5JVD
Tubulin-TUB092 complex
Deposited 2016-05-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GOL GLYCEROL × 3
6NL (2E)-3-(3-hydroxy-4-methoxyphenyl)-1-(7-methoxy-2H-1,3-benzodioxol-5-yl)-2-methylprop-2-en-1-one × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;6% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole
|
Resolution 2.39 Å
R-free 0.208
|
|
5LA6
Tubulin-pironetin complex
Deposited 2016-06-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
X3H PIRONETIN × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;5% PEG, 12% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.10 Å
R-free 0.231
|
|
5LOV
DZ-2384 tubulin complex
Deposited 2016-08-10
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
71E DZ 2384 × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;4-10% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole
|
Resolution 2.40 Å
R-free 0.241
|
|
5LP6
Crystal structure of Tubulin-Stathmin-TTL-Thiocolchicine Complex
Deposited 2016-08-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 8
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
71P ~{N}-[(7~{R})-1,2,3-trimethoxy-10-methylsulfanyl-9-oxidanylidene-6,7-dihydro-5~{H}-benzo[a]heptalen-7-yl]ethanamide × 1
CA CALCIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293.15 K;Crystals grew overnight in precipitant solution consisting of 6.5% (v/v) polyethylene glycol 4000, 4% (v/v) glycerol, 0.1 M MES, 30 mM CaCl2 and 30 mM MgCl2 (pH 6.6) reaching their maximum dimensions within few days
|
Resolution 2.90 Å
R-free 0.305
|
|
5LXS
Tubulin-KS-1-199-32 complex
Deposited 2016-09-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
7AO [(3~{Z},5~{S},6~{S},7~{S},8~{R},9~{S},11~{Z},13~{S},14~{S},15~{S},16~{Z},18~{S})-19-[(2~{S},3~{R},4~{S},5~{R})-3,5-dimethyl-4-oxidanyl-6-oxidanylidene-oxan-2-yl]-5,7,9,11,13,15-hexamethyl-8,14,18-tris(oxidanyl)nonadeca-1,3,11,16-tetraen-6-yl] ~{N}-[3-[(3-azidophenyl)carbonylamino]propyl]carbamate × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;0-3% PEG, 1-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.20 Å
R-free 0.227
|
|
5LXT
Tubulin-Discodermolide complex
Deposited 2016-09-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
7AK (+)-Discodermolide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;0-3% PEG, 1-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 1.90 Å
R-free 0.208
|
|
5LYJ
Tubulin-Combretastatin A4 complex
Deposited 2016-09-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 5
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
7BA Combretastatin A4 × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;6% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole
|
Resolution 2.40 Å
R-free 0.217
|
|
5M50
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
Deposited 2016-10-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–427(427 aa)
Chain E
1–427(427 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
TA1 TAXOL × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8;BRB80
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.30 Å
|
|
5M54
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
Deposited 2016-10-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
2–427(426 aa)
Chain E
2–427(426 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
TA1 TAXOL × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8;BRB80
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 8.00 Å
|
|
5M5C
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
Deposited 2016-10-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
2–427(426 aa)
Chain E
2–427(426 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
TA1 TAXOL × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8;BRB80
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.80 Å
|
|
5M5I
Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus conformation allows formation of a cover neck bundle.
Deposited 2016-10-21
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 9.30 Å
|
|
5M5L
Pseudo-atomic model of microtubule-bound S. pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations
Deposited 2016-10-21
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 9.30 Å
|
|
5M5M
Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.
Deposited 2016-10-21
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 9.30 Å
|
|
5M5N
Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.
Deposited 2016-10-22
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 9.30 Å
|
|
5M5O
Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.
Deposited 2016-10-22
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 9.30 Å
|
|
5M7E
Tubulin-BKM120 complex
Deposited 2016-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GOL GLYCEROL × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
SD5 5-[2,6-di(morpholin-4-yl)pyrimidin-4-yl]-4-(trifluoromethyl)pyridin-2-amine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;3% PEG 4000, 4-6% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 100 MM MES/IMIDAZOLE
|
Resolution 2.05 Å
R-free 0.203
|
|
5M7G
Tubulin-MTD147 complex
Deposited 2016-10-27
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GOL GLYCEROL × 2
FB7 5-(2,6-dimorpholin-4-ylpyridin-4-yl)-4-(trifluoromethyl)pyridin-2-amine × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;3% PEG 4000, 4-6% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 100 MM MES/IMIDAZOLE
|
Resolution 2.25 Å
R-free 0.217
|
|
5M8D
Tubulin MTD265-R1 complex
Deposited 2016-10-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GOL GLYCEROL × 1
UGI 5-(6-morpholin-4-yl-2-pyrrolidin-1-yl-pyrimidin-4-yl)-4-(trifluoromethyl)pyridin-2-amine × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;3% PEG 4000, 4-6% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 100 MM MES/IMIDAZOLE
|
Resolution 2.25 Å
R-free 0.210
|
|
5M8G
Tubulin-MTD265 complex
Deposited 2016-10-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GOL GLYCEROL × 1
918 5-(2-morpholin-4-yl-6-pyrrolidin-1-yl-pyrimidin-4-yl)-4-(trifluoromethyl)pyridin-2-amine × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;3% PEG 4000, 4-6% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 100 MM MES/IMIDAZOLE
|
Resolution 2.15 Å
R-free 0.208
|
|
5MF4
Tubulin-Dictyostatin complex
Deposited 2016-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 3
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
7LZ (3~{Z},5~{E},7~{R},8~{S},10~{S},11~{Z},13~{S},14~{R},15~{S},17~{S},20~{R},21~{S},22~{S})-22-[(2~{S},3~{Z})-hexa-3,5-dien-2-yl]-7,13,15,17,21-pentamethyl-8,10,14,20-tetrakis(oxidanyl)-1-oxacyclodocosa-3,5,11-trien-2-one × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;5% PEG, 12% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 0.1M MES/0.1M IMIDAZOLE
|
Resolution 2.30 Å
R-free 0.233
|
|
5ND3
Microtubule-bound MKLP2 motor domain in the with no nucleotide
Deposited 2017-03-07
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.10 Å
|
|
5ND4
Microtubule-bound MKLP2 motor domain in the presence of ADP.AlFx
Deposited 2017-03-07
|
Different construct
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
2–427(426 aa)
|
Not recorded
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
ALF TETRAFLUOROALUMINATE ION × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.40 Å
|
|
5ND7
Microtubule-bound MKLP2 motor domain in the presence of AMPPNP
Deposited 2017-03-07
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
TA1 TAXOL × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 7.90 Å
|
|
5NFZ
TUBULIN-MTC complex
Deposited 2017-03-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GOL GLYCEROL × 1
8WB 2-methoxy-5-(2,3,4-trimethoxyphenyl)cyclohepta-2,4,6-trien-1-one × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;5% PEG 4K, 12-14% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole, pH 6.7
|
Resolution 2.10 Å
R-free 0.218
|
|
5NG1
TUBULIN-MTC-zampanolide complex
Deposited 2017-03-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
8WB 2-methoxy-5-(2,3,4-trimethoxyphenyl)cyclohepta-2,4,6-trien-1-one × 2
8WE (2~{Z},4~{E})-~{N}-[(~{S})-oxidanyl-[(1~{S},2~{E},5~{S},11~{R},17~{S},19~{R})-3,11,19-trimethyl-7,13-bis(oxidanylidene)-6,21-dioxabicyclo[15.3.1]henicos-2-en-5-yl]methyl]hexa-2,4-dienamide × 1
GOL GLYCEROL × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ZPN (2Z,4E)-N-[(S)-[(1S,2E,5S,8E,10Z,17S)-3,11-dimethyl-19-methylidene-7,13-dioxo-6,21-dioxabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl](hydroxy)methyl]hexa-2,4-dienamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;5% PEG 4K, 12-14% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole, pH 6.7
|
Resolution 2.20 Å
R-free 0.220
|
|
5NJH
Triazolopyrimidines stabilize microtubules by binding to the vinca inhibitor site of tubulin
Deposited 2017-03-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
8Z8 5-chloranyl-7-[(1~{R},5~{S})-3-methoxy-8-azabicyclo[3.2.1]octan-8-yl]-6-[2,4,6-tris(fluoranyl)phenyl]-[1,2,4]triazolo[1,5-a]pyrimidine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;10% PEG 4K, 20% glycerol, 30 mM CaCl2, 30 mM MgCl2, 0.1 M MES/imidazole, pH 6.7, 1 mM AMPPCP, 10 mM DTT, 0.1 mM GDP
|
Resolution 2.39 Å
R-free 0.237
|
|
5NM5
Tubulin Darpin room-temperature structure in complex with Colchicine determined by serial millisecond crystallography
Deposited 2017-04-05
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;20-24% PEG 3350, 0.2 M Ammonium Sulfate, 0.1 M Bis-Tris Methane pH5.5
|
Resolution 2.05 Å
R-free 0.239
|
|
5NQT
Tubulin Darpin room-temperature structure determined by serial millisecond crystallography
Deposited 2017-04-21
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.5;293 K;20-24% PEG 3350, 0.2 M Ammonium Sulfate, 0.1 M Bis-Tris Methane pH5.5
|
Resolution 2.15 Å
R-free 0.226
|
|
5NQU
Tubulin Darpin cryo structure
Deposited 2017-04-21
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.5;293 K;20-24% PEG 3350, 0.2 M Ammonium Sulfate, 0.1 M Bis-Tris Methane pH5.5
|
Resolution 1.80 Å
R-free 0.207
|
|
5O7A
Quinolin-6-yloxyacetamides are microtubule destabilizing agents that bind to the colchicine site of tubulin
Deposited 2017-06-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MG MAGNESIUM ION × 4
9N5 (2~{R})-2-(3-ethynylquinolin-6-yl)oxy-2-methoxy-~{N}-[(1~{E})-1-methoxyimino-2-methyl-propan-2-yl]ethanamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;10% PEG 4000, 20% glycerol, 30 mM CaCl2, 30 mM MgCl2, 0.1 M MES/imidazole, pH 6.7, 1 mM AMPPCP, 10 mM DTT, 0.1 mM GDP
|
Resolution 2.50 Å
R-free 0.256
|
|
5OSK
Tubulin-7j complex
Deposited 2017-08-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 7
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A9Q 3-(2,5-Dimethoxybenzyl)-7-sulfamoyloxy-6-methoxy-3,4-dihydroquinazolin-2(1H)-one × 1
CA CALCIUM ION × 1
IMD IMIDAZOLE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;10% PEG 4K, 16% glycerol, 30 mM MgCl2, 30 mM CaCl2, and 100 mM MES/Imidazole (pH 6.7)
|
Resolution 2.11 Å
R-free 0.232
|
|
5OV7
tubulin - rigosertib complex
Deposited 2017-08-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 1
GOL GLYCEROL × 6
GDP GUANOSINE-5'-DIPHOSPHATE × 2
6FS N-[2-methoxy-5-({[(E)-2-(2,4,6-trimethoxyphenyl)ethenyl]sulfonyl}methyl)phenyl]glycine × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;4 to 10% PEG 4K, 4 to 6% glycerol, 30 mM MgCl2, 30 mM CaCl2, and 100 mM MES/imidazole, pH 6.7
|
Resolution 2.40 Å
R-free 0.235
|
|
5S4L
Tubulin-Z1891773393-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WV1 N-{4-[(1R)-1-aminoethyl]phenyl}cyclopropanecarboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.235
|
|
5S4M
Tubulin-Z2142244288-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
WV4 N-ethyl-2-fluoro-4-(methylsulfonyl)aniline × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.15 Å
R-free 0.243
|
|
5S4N
Tubulin-Z285782452-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
UVA N-methyl-2-(methylsulfonyl)aniline × 4
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.53 Å
R-free 0.258
|
|
5S4O
Tubulin-Z48847594-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
O0J N-[4-(2-amino-1,3-thiazol-4-yl)phenyl]acetamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.262
|
|
5S4P
Tubulin-Z275165822-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
WNY 1-[4-(4-chlorophenyl)piperazin-1-yl]ethan-1-one × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.29 Å
R-free 0.244
|
|
5S4Q
Tubulin-Z422344882-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WVD 4-(4-methyl-1,3-thiazole-5-carbonyl)piperazin-2-one × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.59 Å
R-free 0.281
|
|
5S4R
Tubulin-Z117233350-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
NW7 3-ethyl-5-methyl-N-(5-methyl-1,2-oxazol-3-yl)-1,2-oxazole-4-carboxamide × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.35 Å
R-free 0.251
|
|
5S4S
Tubulin-Z240297434-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
K0M 3-methyl-N-(1-methyl-1H-pyrazol-3-yl)-1,2-oxazole-5-carboxamide × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.35 Å
R-free 0.284
|
|
5S4T
Tubulin-Z328695024-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
K1G N,1-dimethyl-N-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.27 Å
R-free 0.246
|
|
5S4U
Tubulin-Z30620520-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GX4 cyclopropyl-[4-(4-fluorophenyl)piperazin-1-yl]methanone × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.39 Å
R-free 0.252
|
|
5S4V
Tubulin-Z57040482-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
9KS N-(2-hydroxyphenyl)acetamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.242
|
|
5S4W
Tubulin-Z1416571195-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WZ7 2-[(cyclopent-3-en-1-yl)amino]pyridine-4-carboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.80 Å
R-free 0.268
|
|
5S4X
Tubulin-Z2856434917-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
JHD 1-(3,4-dimethoxyphenyl)methanamine × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.53 Å
R-free 0.245
|
|
5S4Y
Tubulin-Z2856434857-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
NSJ 3-[(thiomorpholin-4-yl)methyl]phenol × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.238
|
|
5S4Z
Tubulin-Z28290384-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WN1 N-(2-fluorophenyl)-3-methoxybenzamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.10 Å
R-free 0.242
|
|
5S50
Tubulin-Z57299526-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WZD N-[(furan-2-yl)methyl]-1H-benzimidazol-2-amine × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 3.10 Å
R-free 0.270
|
|
5S51
Tubulin-Z1251207602-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
RWS 1-(5-methyl-1,3,4-thiadiazol-2-yl)piperidine × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.40 Å
R-free 0.245
|
|
5S52
Tubulin-Z50145861-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
W1P 5-methyl-2-phenyl-2,4-dihydro-3H-pyrazol-3-one × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.83 Å
R-free 0.297
|
|
5S53
Tubulin-Z1349163663-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WZM 6-[cyclobutyl(methyl)amino]pyridazine-3-carboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.75 Å
R-free 0.267
|
|
5S54
Tubulin-Z2856434816-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
WLS 1-(pyridin-4-yl)-N-[(thiophen-2-yl)methyl]methanamine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.40 Å
R-free 0.250
|
|
5S55
Tubulin-Z106307058-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
WZP 2-methyl-1-[4-(propan-2-yl)piperazin-1-yl]propan-1-one × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.236
|
|
5S56
Tubulin-Z2856434783-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
O3G N-benzyl-1-(4-fluorophenyl)methanamine × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.239
|
|
5S57
Tubulin-Z2856434883-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
WZS 1-{4-[(2-phenylethyl)amino]piperidin-1-yl}ethan-1-one × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.45 Å
R-free 0.245
|
|
5S58
Tubulin-Z2856434826-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
NUY [4-(propan-2-yl)piperazin-1-yl](thiophen-2-yl)methanone × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.246
|
|
5S59
Tubulin-Z1324080698-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
UR1 3-fluoro-5-methylbenzene-1-sulfonamide × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.60 Å
R-free 0.268
|
|
5S5A
Tubulin-Z1449748885-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WZY N-(4-methoxyphenyl)glycinamide × 4
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.35 Å
R-free 0.237
|
|
5S5B
Tubulin-Z906021418-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
K2G 5-chloro-2-(propan-2-yl)pyrimidine-4-carboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.244
|
|
5S5C
Tubulin-Z44592329-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
K0G N-phenyl-N'-pyridin-3-ylurea × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.40 Å
R-free 0.244
|
|
5S5D
Tubulin-Z32400357-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
NZJ 1-(3-methylbenzene-1-carbonyl)piperidine-4-carboxamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 1.90 Å
R-free 0.227
|
|
5S5E
Tubulin-Z1515654336-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
UQJ 3-(difluoromethyl)-1-methyl-1H-pyrazole-4-carboxamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.67 Å
R-free 0.227
|
|
5S5F
Tubulin-Z87615031-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
UQM N-[4-(2-amino-2-oxoethyl)phenyl]acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.24 Å
R-free 0.262
|
|
5S5G
Tubulin-Z1129283193-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
SZY N-(4-methylpyridin-3-yl)acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.69 Å
R-free 0.271
|
|
5S5H
Tubulin-Z2074076908-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WLG 1-(5-azaspiro[2.5]octan-5-yl)-2-(difluoromethoxy)ethan-1-one × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.50 Å
R-free 0.270
|
|
5S5I
Tubulin-Z295848548-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
X0G 4-[(3-cyclopropyl-1,2,4-oxadiazol-5-yl)methyl]morpholine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.49 Å
R-free 0.259
|
|
5S5J
Tubulin-Z1148747945-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WKY N-(3-methylpyridin-4-yl)acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.238
|
|
5S5K
Tubulin-Z2472938267-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
S6V 1-[2-(2-oxidanylidenepyrrolidin-1-yl)ethyl]-3-phenyl-urea × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.41 Å
R-free 0.248
|
|
5S5L
Tubulin-Z1492796719-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
X0M N-[(3S)-1,2,3,4-tetrahydroquinolin-3-yl]acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.235
|
|
5S5M
Tubulin-Z45527714-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
X0S 2-chloro-N-methylbenzene-1-sulfonamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.70 Å
R-free 0.269
|
|
5S5N
Tubulin-Z165170770-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
W0Y N-methyl-4-sulfamoylbenzamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.90 Å
R-free 0.274
|
|
5S5O
Tubulin-Z27682767-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WGY N-(4-sulfamoylphenyl)propanamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.235
|
|
5S5P
Tubulin-Z53825177-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
VVG N-(2-fluorophenyl)ethanesulfonamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.79 Å
R-free 0.265
|
|
5S5Q
Tubulin-Z396380540-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
HR5 ~{N}-(cyclobutylmethyl)-1,5-dimethyl-pyrazole-4-carboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.05 Å
R-free 0.244
|
|
5S5R
Tubulin-Z33452106-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GVV ~{N}-(4-methyl-2-oxidanyl-phenyl)propanamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.244
|
|
5S5S
Tubulin-Z166605480-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
VWA (1S)-1-(4-fluorophenyl)-N-methylethan-1-amine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.36 Å
R-free 0.254
|
|
5S5T
Tubulin-Z198194394-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
O1M 4-(4-fluorophenyl)piperazine-1-carboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.53 Å
R-free 0.256
|
|
5S5U
Tubulin-Z1124201124-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOJ ethyl 1~{H}-pyrazole-4-carboxylate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.50 Å
R-free 0.256
|
|
5S5V
Tubulin-Z32386228-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
HR8 5-chloranyl-2-methoxy-~{N}-(2-methylpropyl)benzamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.70 Å
R-free 0.267
|
|
5S5W
Tubulin-Z53860899-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
STV ~{N}-(1,3-benzodioxol-5-ylmethyl)ethanesulfonamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.35 Å
R-free 0.265
|
|
5S5X
Tubulin-Z45705015-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
S9S ~{N}-[2-(4-fluorophenyl)ethyl]methanesulfonamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.32 Å
R-free 0.243
|
|
5S5Y
Tubulin-Z26781952-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
W0A N-[(1H-benzimidazol-2-yl)methyl]butanamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.26 Å
R-free 0.231
|
|
5S5Z
Tubulin-Z2856434944-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
AWD ~{N}-(4-fluorophenyl)-4-methyl-piperazine-1-carboxamide × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.55 Å
R-free 0.253
|
|
5S60
Tubulin-Z27695365-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
X1G N-[(2H-1,3-benzodioxol-5-yl)methyl]-3-methylbutanamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.228
|
|
5S61
Tubulin-Z57472297-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
AYV 1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-urea × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 1.95 Å
R-free 0.239
|
|
5S62
Tubulin-Z100642432-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
WJ7 2-bromo-4-fluoro-N,N-dimethylbenzamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.75 Å
R-free 0.267
|
|
5S63
Tubulin-Z2241115980-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
NV7 1-[(furan-2-yl)methyl]-4-(methylsulfonyl)piperazine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.60 Å
R-free 0.268
|
|
5S64
Tubulin-Z28870646-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
TVP (2S)-1-ACETYL-2-METHYL-1,2,3,4-TETRAHYDROQUINOLINE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.75 Å
R-free 0.262
|
|
5S65
Tubulin-Z1354416068-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
X1J 1-(5-amino-1,3-dihydro-2H-isoindol-2-yl)ethan-1-one × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.234
|
|
5S66
Tubulin-Z2856434929-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
LVV 4-[(4-methylphenyl)methyl]-1,4-thiazinane 1,1-dioxide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.10 Å
R-free 0.243
|
|
5S67
Tubulin-Z1896597864-complex
Deposited 2020-11-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
X1M 1-(6-methoxypyridin-2-yl)-N-methylmethanamine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.10 Å
R-free 0.238
|
|
5SB3
Tubulin-todalam-4-complex
Deposited 2021-07-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
47F N-[4-(2-anilino-1,3-thiazol-4-yl)phenyl]acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.20 Å
R-free 0.225
|
|
5SB4
Tubulin-todalam-8-complex
Deposited 2021-07-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
4B6 N-{4-[2-(2-fluoroanilino)-1,3-thiazol-4-yl]phenyl}acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.50 Å
R-free 0.230
|
|
5SB5
Tubulin-todalam-9-complex
Deposited 2021-07-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
4CJ N-{4-[2-(3-fluoroanilino)-1,3-thiazol-4-yl]phenyl}acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.31 Å
R-free 0.220
|
|
5SB6
Tubulin-todalam-10-complex
Deposited 2021-07-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
4FK N-{4-[2-(4-fluoroanilino)-1,3-thiazol-4-yl]phenyl}acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.237
|
|
5SB7
Tubulin-todalam-18-complex
Deposited 2021-07-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
4I2 N-(4-{2-[3-(trifluoromethyl)anilino]-1,3-thiazol-4-yl}phenyl)acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.10 Å
R-free 0.235
|
|
5SB8
Tubulin-maytansinoid-3-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
IMD IMIDAZOLE × 1
5IS (1S,2R,3S,5S,6S,16E,18E,20R)-11-chloro-6-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18,21-hexaene-8,23-dione × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.230
|
|
5SB9
Tubulin-maytansinoid-4a-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
IMD IMIDAZOLE × 1
5IX (1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl phenylacetate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.50 Å
R-free 0.228
|
|
5SBA
Tubulin-maytansinoid-4b-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
IMD IMIDAZOLE × 1
5IJ (1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl acetate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.227
|
|
5SBB
Tubulin-maytansinoid-4c-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
IMD IMIDAZOLE × 1
5JH (1R,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl heptanoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.228
|
|
5SBC
Tubulin-maytansinoid-5a-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
IMD IMIDAZOLE × 1
5JS (1S,2R,3S,5S,6S,16E,18E,20R)-11-chloro-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18,21-hexaen-6-yl phenylacetate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.32 Å
R-free 0.228
|
|
5SBD
Tubulin-maytansinoid-5b-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
IMD IMIDAZOLE × 1
5KI (1S,2R,3S,5S,6S,16E,18E,20R)-11-chloro-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18,21(25)-hexaen-6-yl acetate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.214
|
|
5SBE
Tubulin-maytansinoid-5c-complex
Deposited 2021-07-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
5L5 (1S,2R,3S,5S,6S,16E,18E,20R)-11-chloro-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18,21-hexaen-6-yl hept-6-ynoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;3% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.75 Å
R-free 0.230
|
|
5XAF
Crystal structure of tubulin-stathmin-TTL-Compound Z1 complex
Deposited 2017-03-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 12
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
84F (3S,4R)-4-(3-hydroxy-4-methoxyphenyl)-3-methyl-1-(3,4,5-trimethoxyphenyl)azetidin-2-one × 2
IMD IMIDAZOLE × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;289 K;6% PEG 4000, 8% glycerol, 100mM MES, 30mM CaCl2, 30mM MgCl2, pH 6.7
|
Resolution 2.55 Å
R-free 0.257
|
|
5XAG
Crystal structure of tubulin-stathmin-TTL-Compound Z2 complex
Deposited 2017-03-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 12
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
93X (3~{R},4~{R})-3-(hydroxymethyl)-4-(4-methoxy-3-oxidanyl-phenyl)-1-(3,4,5-trimethoxyphenyl)azetidin-2-one × 2
IMD IMIDAZOLE × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;289 K;6% PEG 4000, 8% glycerol, 100mM MES, 30mM CaCl2, 30mM MgCl2, pH 6.7
|
Resolution 2.56 Å
R-free 0.255
|
|
5XLT
The crystal structure of tubulin in complex with 4'-demethylepipodophyllotoxin
Deposited 2017-05-11
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
89O (5S,5aR,8aR,9R)-9-(3,5-dimethoxy-4-oxidanyl-phenyl)-5-oxidanyl-5a,6,8a,9-tetrahydro-5H-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1M Mes, 30mM CaCl2, 30mM MgCl2 (pH 6.7)
|
Resolution 2.81 Å
R-free 0.249
|
|
5XLZ
The crystal structure of tubulin complexed with a benzylidene derivative of 9(10H)-anthracenone
Deposited 2017-05-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
89U 10-[(4-methoxy-3-oxidanyl-phenyl)methylidene]anthracen-9-one × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1M Mes, 30mM CaCl2, 30mM MgCl2, pH 6.7
|
Resolution 2.30 Å
R-free 0.247
|
|
5YZ3
Crystal structure of T2R-TTL-28 complex
Deposited 2017-12-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
94U N-[4-(diethylamino)phenyl]-4H-pyrrolo[2,3-d][1,3]thiazole-5-carboxamide × 2
NA SODIUM ION × 1
CL CHLORIDE ION × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;298 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.54 Å
R-free 0.234
|
|
5Z4P
Crystal structure of tubulin-stathmin-TTL-Compound TCA complex
Deposited 2018-01-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Fragment:UNP residues 1-425
Chain D
1–431(431 aa)
Fragment:UNP residues 1-425
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
GOL GLYCEROL × 11
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
97O 6,7,8-trimethoxy-1-(4-methoxyphenyl)-4,5-dihydro-2~{H}-benzo[e]indazole × 1
IMD IMIDAZOLE × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;289 K;6% PEG 4000, 8% glycerol, 100mM MES, 30mM CaCl2, 30mM MgCl2, pH 6.7
|
Resolution 2.50 Å
R-free 0.286
|
|
5Z4U
Crystal Structure of T2R-TTL complex with 7a3
Deposited 2018-01-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
96C 4-(4-ethoxyphenyl)-1-methyl-3-(3,4,5-trimethoxyphenyl)-1H-pyrazole × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M Mes, 30 mM CaCl2, 30 mM MgCl2 (pH 6.7)
|
Resolution 3.18 Å
R-free 0.235
|
|
5ZXH
The structure of MT189-tubulin complex
Deposited 2018-05-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Mutation:M170V, I316V
Mutation:M170V, I316V
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
9LX 2-(6-fluoro-3-{[(4-methoxyphenyl)methyl]amino}imidazo[1,2-a]pyridin-2-yl)phenol × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% POLY(ETHYLENE GLYCOL) 4000, 8% GLYCEROL, 0.1 M MES, 30 MM CACL2, 30 MM MGCL2 (pH 6.7)
|
Resolution 2.80 Å
R-free 0.259
|
|
6AGK
The structure of CH-II-77-tubulin complex
Deposited 2018-08-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 3
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
9WR [6-(3-hydroxy-4-methylphenyl)pyridin-2-yl](3,4,5-trimethoxyphenyl)methanone × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;6% POLYETHYLENE GLYCOL 4000, 8% GLYCEROL, 0.1M MES, 30MM CACL2, 30MM MGCL2, PH 6.7,
|
Resolution 2.80 Å
R-free 0.264
|
|
6BBN
Crystal structure of a curved tubulin complex induced by the kinesin-13 Kif2A
Deposited 2017-10-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
PO4 PHOSPHATE ION × 1
ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;277 K;8% PEG8000, 6% ethylene glycol, 10 mM DDT, 100 mM HEPES, pH 7.5
|
Resolution 3.51 Å
R-free 0.287
|
|
6EG5
The structure of SB-1-202-tubulin complex
Deposited 2018-08-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 6
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
J7S 4-(2-chloropyrido[2,3-d]pyrimidin-4-yl)-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;6% POLYETHYLENE GLYCOL 4000, 8% GLYCEROL, 0.1 M MES, 30 MM CACL2, 30 MM MGCL2, PH 6.7
|
Resolution 2.45 Å
R-free 0.236
|
|
6F7C
TUBULIN-Compound 12 complex
Deposited 2017-12-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
CVT 3,4,5-trimethoxy-~{N}-[(~{E})-naphthalen-1-ylmethylideneamino]benzamide × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;5% PEG 4K, 16% GLYCEROL, 30 MM
MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 0.1M MES/0.1M IMIDAZOLE
|
Resolution 2.00 Å
R-free 0.243
|
|
6FII
Tubulin-Spongistatin complex
Deposited 2018-01-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
CA CALCIUM ION × 3
MG MAGNESIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 2
DMS DIMETHYL SULFOXIDE × 1
SG9 Spongistatin-1 × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;294 K;10 % PEG 4k, 16 % glycerol, 30 mM MgCl2, 30 mM CaCl2, and 100 mM 2-(N-morpholino)ethanesulfonic acid/imidazole
|
Resolution 2.40 Å
R-free 0.216
|
|
6FJF
Tubulin-FcMaytansine complex
Deposited 2018-01-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
DMS DIMETHYL SULFOXIDE × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
PEG DI(HYDROXYETHYL)ETHER × 1
DKE FcMaytansine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;294 K;10 % PEG 4k, 16 % glycerol, 30 mM MgCl2, 30 mM CaCl2, and 100 mM 2-(N-morpholino)ethanesulfonic acid/imidazole
|
Resolution 2.40 Å
R-free 0.258
|
|
6FJM
tubulin-Disorazole Z complex
Deposited 2018-01-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 7
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
DKN Disorazole Z × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;294 K;10 % PEG 4k, 16 % glycerol, 30 mM MgCl2, 30 mM CaCl2, and 100 mM 2-(N-morpholino)ethanesulfonic acid/imidazole
|
Resolution 2.10 Å
R-free 0.213
|
|
6FKJ
Tubulin-TUB075 complex
Deposited 2018-01-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GOL GLYCEROL × 2
DLW (5~{S})-2-[(~{E})-~{N}-(2-ethoxyphenyl)-~{C}-methyl-carbonimidoyl]-3-oxidanyl-5-phenyl-cyclohex-2-en-1-one × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
PG4 TETRAETHYLENE GLYCOL × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;294 K;5% PEG 4K, 12% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole
|
Resolution 2.15 Å
R-free 0.206
|
|
6FKL
Tubulin-TUB015 complex
Deposited 2018-01-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
DLK 2-{1-[(2-Methoxyphenyl)amino]ethylidene}-5-phenyl-1,3-cyclohexanedione × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;294 K;5% PEG 4K, 12% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole
|
Resolution 2.10 Å
R-free 0.217
|
|
6GF3
Tubulin-Jerantinine B acetate complex
Deposited 2018-04-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
EX5 Jerantinine B × 1
EDO 1,2-ETHANEDIOL × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;10% PEG 4K, 12% GLYCEROL, 30 MM
REMARK 280 MGCL2, 30 MM CACL2, 100 MM MES/IMIDAZOLE
|
Resolution 2.40 Å
R-free 0.251
|
|
6GJ4
Tubulin-6j complex
Deposited 2018-05-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
EZW 5-(quinolin-5-yl)naphtho[2,3-b]pyrrolo[1,2-d][1,4]oxazepin-4-yl acetate × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;10% PEG 4K, 12.5% GLYCEROL, 30 MM MAGNESIUM CHLORIDE, 30 MM CALCIUM CHLORIDE, 0.1M MES / 0.1M IMIDAZOLE
|
Resolution 2.40 Å
R-free 0.241
|
|
6GZE
Tubulin-GDP.BeF complex
Deposited 2018-07-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
BEF BERYLLIUM TRIFLUORIDE ION × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293.15 K;0.1M Mes / 0.1M Imidazole pH 6.5, 0.3M CaCl2 / 0.3M MgCl2, 5mM L-tyrosine, 5.5% glycerol, 8.8% PEG4000
|
Resolution 2.49 Å
R-free 0.257
|
|
6HX8
Tubulin-STX3451 complex
Deposited 2018-10-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
GXN [2-[(3-bromanyl-4,5-dimethoxy-phenyl)methyl]-7-methoxy-3,4-dihydro-1~{H}-isoquinolin-6-yl] sulfamate × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;10% PEG 4K, 16% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/imidazole pH 6.7
|
Resolution 2.40 Å
R-free 0.240
|
|
6I5C
Long wavelength native-SAD phasing of Tubulin-Stathmin-TTL complex
Deposited 2018-11-13
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 5
CL CHLORIDE ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% PEG, 16% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.95 Å
R-free 0.208
|
|
6JCJ
Structure of crolibulin in complex with tubulin
Deposited 2019-01-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
BG0 (4R)-2,7,8-triamino-4-(3-bromo-4,5-dimethoxyphenyl)-4H-1-benzopyran-3-carbonitrile × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;6% POLYETHYLENE GLYCOL 4000, 8% GLYCEROL, 0.1 M MES, 30 MM CACL2, 30 MM MGCL2, PH 6.7
|
Resolution 2.50 Å
R-free 0.282
|
|
6K9V
Crystal structure of tubulin in complex with inhibitor D64
Deposited 2019-06-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
D3L (5-methoxy-1H-indol-2-yl)-phenyl-methanone × 2
CA CALCIUM ION × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.54 Å
R-free 0.248
|
|
6KNZ
Crystal structure of T2R-TTL-KXO1 complex
Deposited 2019-08-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
CA CALCIUM ION × 6
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
DN0 2-[5-[4-(2-morpholin-4-ylethoxy)phenyl]pyridin-2-yl]-~{N}-(phenylmethyl)ethanamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.48 Å
R-free 0.261
|
|
6N47
The structure of SB-2-204-tubulin complex
Deposited 2018-11-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
MG MAGNESIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
KB4 4-(2-chloropyrido[3,2-d]pyrimidin-4-yl)-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% POLYETHYLENE GLYCOL 4000, 8% GLYCEROL, 0.1 M MES, 30 MM CACL2, 30 MM MGCL2, PH 6.7
|
Resolution 2.60 Å
R-free 0.246
|
|
6OJQ
Monomeric kinesin-1 motor domain in no-nucleotide state bound to GMPCPP-stabilized microtubule
Deposited 2019-04-12
|
Different construct
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–426(426 aa)
|
Not recorded
|
G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.67 Å
|
|
6QQN
Tubulin-TH588 complex
Deposited 2019-02-18
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
EDO 1,2-ETHANEDIOL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
2GE N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diamine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;1% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole pH 6.7
|
Resolution 2.30 Å
R-free 0.244
|
|
6QTN
Tubulin-cyclostreptin complex
Deposited 2019-02-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
EDO 1,2-ETHANEDIOL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
JHH Cyclostreptin × 2
GOL GLYCEROL × 3
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;6% glycerol, 3% PEG4000, 0.1 M Mes/0.1 M imidazole pH 6.7, 30 mM CaCl2, 30 mM MgCl2
|
Resolution 1.90 Å
R-free 0.213
|
|
6REV
Cryo-EM structure of the N-terminal DC repeat (NDC) of human doublecortin (DCX) bound to 13-protofilament GDP-microtubule
Deposited 2019-04-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–429(429 aa)
Chain b
1–429(429 aa)
|
Not recorded
|
GDP GUANOSINE-5'-DIPHOSPHATE × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
6RF2
Cryo-EM structure of the C-terminal DC repeat (CDC) of human doublecortin (DCX) bound to 13-protofilament GDP.Pi-microtubule
Deposited 2019-04-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–429(429 aa)
Chain b
1–429(429 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
PO4 PHOSPHATE ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.20 Å
|
|
6RF8
Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 13-protofilament GDP-microtubule
Deposited 2019-04-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–429(429 aa)
Chain b
1–429(429 aa)
|
Not recorded
|
GDP GUANOSINE-5'-DIPHOSPHATE × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
6RFD
Cryo-EM structure of the N-terminal DC repeat (NDC) of NDC-NDC chimera (human sequence) bound to 14-protofilament GDP-microtubule
Deposited 2019-04-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–429(429 aa)
Chain b
1–429(429 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.90 Å
|
|
6S8K
Structure, Thermodynamics, and Kinetics of Plinabulin Binding to two Tubulin Isotypes
Deposited 2019-07-10
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
PN6 (3Z,6Z)-3-benzylidene-6-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]piperazine-2,5-dione × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 5.5;293 K;100 mM Bis-TrisMethane, pH 5.5, supplemented with 200 mM ammonium sulfate and 25% PEG3350
|
Resolution 1.52 Å
R-free 0.203
|
|
6S9E
Tubulin-GDP.AlF complex
Deposited 2019-07-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
CL CHLORIDE ION × 1
GOL GLYCEROL × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
AF3 ALUMINUM FLUORIDE × 1
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;295 K;0.1M MES, 0.1M IMIDAZOLE, pH6.5, 0.03M CaCl2, 0.03M MgCl2, 5mM L-Tyrosine, 5% Glycerol, 5.5% PEG4000
|
Resolution 2.25 Å
R-free 0.228
|
|
6SES
Tubulin-B2 complex
Deposited 2019-07-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
L95 [(3~{Z},5~{S},6~{S},7~{S},8~{R},9~{S},11~{Z},13~{S},14~{S},15~{S},16~{Z},18~{S})-5,7,9,11,13,15-hexamethyl-19-[(2~{S},3~{R})-3-methyl-6-oxidanylidene-oxan-2-yl]-8,14,18-tris(oxidanyl)nonadeca-3,11,16-trien-6-yl] carbamate × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;5% PEG 4K, 9% GLYCEROL, 30 MM MGCL2,
30 MM CACL2, 0.1 M MES/IMIDAZOLE PH 6.7
|
Resolution 2.00 Å
|
|
6Y6D
Tubulin-7-Aminonoscapine complex
Deposited 2020-02-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
OBQ (3~{S})-7-azanyl-6-methoxy-3-[(5~{R})-4-methoxy-6-methyl-7,8-dihydro-5~{H}-[1,3]dioxolo[4,5-g]isoquinolin-5-yl]-3~{H}-2-benzofuran-1-one × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;5% PEG 4K, 11% glycerol, 30 mM MgCl2, 30 mM CaCl2, 100 mM MES/Imidazole, pH 6.5
|
Resolution 2.20 Å
R-free 0.224
|
|
6ZWB
Z-SBTub3 photoswitch bound to tubulin-DARPin D1 complex
Deposited 2020-07-28
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
QRN 5-[2-(1,3-benzothiazol-2-yl)ethyl]-2-methoxy-phenol × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;PEG 3000, ammonium sulfate, bis-tris methane
|
Resolution 1.75 Å
R-free 0.234
|
|
6ZWC
Z-SBTub2 photoswitch bound to tubulin-DARPin D1 complex
Deposited 2020-07-28
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
QRQ 2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;PEG 3000, ammonium sulfate, bis-tris methane
|
Resolution 2.04 Å
R-free 0.281
|
|
7AC5
Structure of Tubulin Darpin complex 1 collected by rotation serial crystallography on a COC membrane at a synchrotron source
Deposited 2020-09-10
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
PG0 2-(2-METHOXYETHOXY)ETHANOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;293 K;26% PEG 3000, 0.2 M ammonium sulfate and 0.1 M bis-tris methane pH 5.5
|
Resolution 2.26 Å
R-free 0.258
|
|
7AU5
Tubulin-noscapine-analogue-14e complex
Deposited 2020-11-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
RYK (5~{R})-5-[(1~{S})-4,5-dimethoxy-1,3-dihydro-2-benzofuran-1-yl]-~{N}-ethyl-4-methoxy-7,8-dihydro-5~{H}-[1,3]dioxolo[4,5-g]isoquinoline-6-carboxamide × 1
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;298 K;4 % PEG 4K, 7 % glycerol, 30 mM MgCl2, 30 mM CaCl2, 5 mM L-tyrosine and 100 mM MES/Imidazole pH 6.5
|
Resolution 2.20 Å
R-free 0.212
|
|
7CPD
Crystal structure of T2R-TTL-(+)-6-Br-JP18 complex
Deposited 2020-08-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 3
G9U (6R)-6-[(6-bromanyl-1H-indol-3-yl)methyl]-6,7,8,9-tetrahydrobenzo[7]annulen-5-one × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;289 K;6-10% PEG 4k, 4-10% glycerol, 30 mM MgCl2, 100 mM MES/Imidazole pH 6.5-6.9
|
Resolution 2.51 Å
R-free 0.240
|
|
7CPQ
crystal structure of T2R-TTL-(+)-6-Cl-JP18 complex
Deposited 2020-08-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
G9X (6R)-6-[(6-chloranyl-1H-indol-3-yl)methyl]-6,7,8,9-tetrahydrobenzo[7]annulen-5-one × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 2
IMD IMIDAZOLE × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;289 K;6-10% PEG 4k, 4-10% glycerol, 30 mM MgCl2, 100 mM MES/Imidazole pH 6.5-6.9
|
Resolution 2.60 Å
R-free 0.267
|
|
7E4P
Crystal structure of tubulin in complex with Ansamitocin P3
Deposited 2021-02-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
BKF (1S,2S,3S,5S,6S,16Z,18Z,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.40 Å
R-free 0.229
|
|
7E4Q
Crystal structure of tubulin in complex with L-DM1-SMe
Deposited 2021-02-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
BKX (1S,2R,3R,5R,6R,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl (2S)-2-{methyl[3-(methyldisulfanyl)propanoyl]amino}propanoate (non-preferred name) × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.50 Å
R-free 0.252
|
|
7E4R
Crystal structure of tubulin in complex with D-DM1-SMe
Deposited 2021-02-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
HZ0 (10E,12E)-86-chloro-14-hydroxy-85,14-dimethoxy-33,2,7,10-tetramethyl-12,6-dioxo-7-aza-1(6,4)-oxazinana-3(2,3)-oxirana-8(1,3)-benzenacyclotetradecaphane-10,12-dien-4-yl N-methyl-N-(3-(methylsulfinothioyl)propanoyl)-D-alaninate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.60 Å
R-free 0.265
|
|
7E4Y
Crystal structure of tubulin in complex with L-DM4-SMe
Deposited 2021-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
BKU (1S,2S,3S,5R,6S,16E,18E,20S,21R)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl (2S)-2-{methyl[3-methyl-3-(methyldisulfanyl)butanoyl]amino}propanoate (non-preferred name) × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.71 Å
R-free 0.239
|
|
7E4Z
Crystal structure of tubulin in complex with Maytansinol
Deposited 2021-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 1
BKL (1R,2S,3S,5S,6S,16E,18E,20R,21S)-11-chloro-6,21-dihydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaene-8,23-dione × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% poly(ethylene glycol) 4000, 8% glycerol, 0.1 M MES (pH 6.7), 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.69 Å
R-free 0.228
|
|
7EN3
Crystal structure of tubulin in complex with Tubulysin analogue TGL
Deposited 2021-04-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 3
J6R (2S,4R)-5-(4-fluorophenyl)-2-methyl-4-[[2-[(1R,3R)-4-methyl-3-[5-methylhexyl-[(2S,3S)-3-methyl-2-[[(2R)-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-1-oxidanyl-pentyl]-1,3-thiazol-4-yl]carbonylamino]pentanoic acid × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;6% PEG, 5% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2
|
Resolution 2.64 Å
R-free 0.239
|
|
7JFR
Auristatin bound to tubulin
Deposited 2020-07-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 7
PDB declaration: heptameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;5% PEG, 12% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 0.1M MES/0.1M imidazole
|
Resolution 2.35 Å
R-free 0.256
|
|
7OGN
Crystal structure of T2R-TTL -mebendazole complex
Deposited 2021-05-07
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 7
CA CALCIUM ION × 4
CL CHLORIDE ION × 2
GOL GLYCEROL × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
V95 methyl N-(6-benzoyl-1H-benzimidazol-2-yl)carbamate × 2
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;295.15 K;MES, Imidazole, calcium chloride, magnesium chloride, L-Tyrosine, glycerol, PEG 4000
|
Resolution 2.20 Å
R-free 0.234
|
|
7VMG
Crystal structure of tubulin with 17j
Deposited 2021-10-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
CL CHLORIDE ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
7PB N-[3-[[6-[(3-methoxyphenyl)amino]pyrimidin-4-yl]amino]phenyl]cyclopropanecarboxamide × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;3% PEG 4000, 4-6% glycerol, 30 mM magnesium chloride, 30 mM calcium chloride, 100 mM MES/Imidazole , pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
|
Resolution 2.39 Å
R-free 0.250
|
|
7VMJ
Crystal structure of tubulin with 17a
Deposited 2021-10-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
7PU N-[3-[[6-[[3-[bis(fluoranyl)methyl]phenyl]amino]pyrimidin-4-yl]amino]phenyl]cyclopropanecarboxamide × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;6% polyethylene glycol 4000, 8% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.90 Å
R-free 0.243
|
|
7VMK
Crystal structure of tubulin with 3
Deposited 2021-10-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
PEG DI(HYDROXYETHYL)ETHER × 1
7PL N-[3-[[6-[[3-(trifluoromethyl)phenyl]amino]pyrimidin-4-yl]amino]phenyl]cyclopropanecarboxamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;6% polyethylene glycol 4000, 8% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.50 Å
R-free 0.232
|
|
7YYY
Molecular snapshots of drug release from tubulin: 1 microsecond after photoactivation
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.20 Å
R-free 0.349
|
|
7YYZ
Molecular snapshots of drug release from tubulin: 10 microseconds after photoactivation.
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.20 Å
R-free 0.355
|
|
7YZ0
Molecular snapshots of drug release from tubulin: 100 microseconds after photoactivation.
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/V)
|
Resolution 2.20 Å
R-free 0.363
|
|
7YZ1
Molecular snapshots of drug release from tubulin: 1 millisecond after photoactivation.
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.20 Å
R-free 0.352
|
|
7YZ2
Molecular snapshots of drug release from tubulin: 10 milliseconds after photoactivation.
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.20 Å
R-free 0.334
|
|
7YZ3
Molecular snapshots of drug release from tubulin: Apo state
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.216
|
|
7YZ5
Molecular snapshots of drug release from tubulin: 100 milliseconds (steady state)
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.11 Å
R-free 0.231
|
|
7YZ6
Molecular snapshots of drug release from tubulin: Dark (steady state)
Deposited 2022-02-18
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.10 Å
R-free 0.220
|
|
7Z01
Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
Deposited 2022-02-21
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
I8R 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.82 Å
R-free 0.255
|
|
7Z02
Z-SBTub2M photoswitch bound to tubulin-DARPin D1 complex
Deposited 2022-02-21
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 1
I8N 6-methyl-2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 2.36 Å
R-free 0.258
|
|
7Z2N
Tubulin-18-complex
Deposited 2022-02-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
IAZ ~{N}-(furan-2-ylmethyl)-6-phenoxy-1~{H}-benzimidazol-2-amine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.17 Å
R-free 0.224
|
|
7Z2P
Tubulin-nocodazole complex
Deposited 2022-02-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
NW6 nocodazole × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.00 Å
R-free 0.209
|
|
7Z7D
Tubulin-Todalam-Vinblastine-complex
Deposited 2022-03-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
VLB (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE × 1
4I2 N-(4-{2-[3-(trifluoromethyl)anilino]-1,3-thiazol-4-yl}phenyl)acetamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.00 Å
R-free 0.236
|
|
7ZX2
Tubulin-Pelophen B complex
Deposited 2022-05-20
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
GOL GLYCEROL × 8
CL CHLORIDE ION × 1
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
K9I (3R,4S,7S,9S,11S)-3,4,11-trihydroxy-7-((R,Z)-4-(hydroxymethyl)hex-2-en-2-yl)-9-methoxy-12,12-dimethyl-6-oxa-1(1,3)-benzenacyclododecaphan-5-one × 1
DMS DIMETHYL SULFOXIDE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293.15 K;Mes, imidazole, calcium chloride, magnesium chloride, L-tyrosine, glycerol, PEG 4000
|
Resolution 2.50 Å
R-free 0.235
|
|
7ZYW
Crystal structure of T2R-TTL-PM534 complex
Deposited 2022-05-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
GOL GLYCEROL × 4
CA CALCIUM ION × 3
MG MAGNESIUM ION × 4
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
KG0 (4R)-N-[(1R)-1-[4-(cyclopropylmethoxy)-6-oxidanylidene-pyran-2-yl]butyl]-4-methyl-2-[(E)-C-methyl-N-oxidanyl-carbonimidoyl]-5H-1,3-thiazole-4-carboxamide × 2
DMS DIMETHYL SULFOXIDE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293.15 K;Mes, Imidazole, Calcium Chloride, Magnesium Chloride, L-tyrosine, Glycerol, PEG4000
|
Resolution 2.45 Å
R-free 0.244
|
|
8A0L
Tubulin-CW1-complex
Deposited 2022-05-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 4
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
KLC (3~{S},4~{R},8~{S},10~{S},12~{S},14~{S})-14-[(~{Z},4~{R})-4-(hydroxymethyl)hex-2-en-2-yl]-4,12-dimethoxy-9,9-dimethyl-3,8,10-tris(oxidanyl)-1-oxacyclotetradecan-2-one × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;293 K;11% PEG 4K, 10% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.00 Å
R-free 0.226
|
|
8A9T
Tubulin-[1,2]oxazoloisoindole-1 complex
Deposited 2022-06-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
LNU ethyl 13-[(3,5-dimethoxyphenyl)methyl]-3-oxa-4,13-diazatricyclo[8.3.0.0^{2,6}]trideca-1(10),2(6),4,11-tetraene-12-carboxylate × 1
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;4% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.237
|
|
8A9Z
Tubulin-[1,2]oxazoloisoindole-2e complex
Deposited 2022-06-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
LO9 7-[(3,5-dimethoxyphenyl)methyl]pyrrolo[3,4-g][1,2]benzoxazole × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;4% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.29 Å
R-free 0.240
|
|
8AHM
Crystal structure of tubulin in complex with C(13)/C(13')-Bis-Desmethyl-Disorazole Z
Deposited 2022-07-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
GOL GLYCEROL × 1
CA CALCIUM ION × 4
DMS DIMETHYL SULFOXIDE × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
M5U dimethyl 2,2'-((12Z,122Z,4S,6Z,8E,10E,15S,17Z,19E,21E)-2,13-dioxo-3,14-dioxa-1(4,2),12(2,4)-dioxazolacyclodocosaphane-6,8,10,17,19,21-hexaene-4,15-diyl)(2S,2'S,3S,3'S,4E,4'E)-bis(3-hydroxyhex-4-enoate) × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293.15 K;0.1 M MES/0.1 M Imidazole pH 6.5, 0.03 M CaCl2/ MgCl2, 5 mM L-Tyr, 8% glycerol, 5.5 % PEG 4000
|
Resolution 2.42 Å
R-free 0.241
|
|
8ASN
Crystal structure of the apo human TTL in complex with tubulin-stathmin
Deposited 2022-08-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 9
PDB declaration: nonameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 4
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 4
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;294 K;4 % Tacsimate pH 6.0, 12 % PEG3350
|
Resolution 2.57 Å
R-free 0.273
|
|
8B7A
Tubulin - maytansinoid - 4 complex
Deposited 2022-09-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 6
CA CALCIUM ION × 5
IMD IMIDAZOLE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
Q0F [(1~{R},2~{R},3~{S},5~{S},6~{S},16~{E},18~{E},20~{R},21~{S})-11-chloranyl-12,20-dimethoxy-2,5,9,16-tetramethyl-21-oxidanyl-8,23-bis(oxidanylidene)-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1^{10,14}.0^{3,5}]hexacosa-10(26),11,13,16,18-pentaen-6-yl] pent-4-enoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;5% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.223
|
|
8B7B
Tubulin - maytansinoid - 6 complex
Deposited 2022-09-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 5
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
PX0 (~{Z})-11-[[(1~{R},2~{R},3~{S},5~{S},6~{S},16~{E},18~{E},20~{R},21~{S})-11-chloranyl-12,20-dimethoxy-2,5,9,16-tetramethyl-21-oxidanyl-8,23-bis(oxidanylidene)-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1^{10,14}.0^{3,5}]hexacosa-10(26),11,13,16,18-pentaen-6-yl]oxy]-11-oxidanylidene-undec-2-enoic acid × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;5% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.25 Å
R-free 0.224
|
|
8B7C
Tubulin-maytansinoid-12 complex
Deposited 2022-09-29
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
IMD IMIDAZOLE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
PWC [(1~{S},2~{R},3~{S},5~{S},6~{S},16~{E},18~{E},20~{R},21~{S})-11-chloranyl-12,20-dimethoxy-2,5,9,16-tetramethyl-21-oxidanyl-8,23-bis(oxidanylidene)-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1^{10,14}.0^{3,5}]hexacosa-10(26),11,13,16,18-pentaen-6-yl] 4-[2-(2-azanylhydrazinyl)ethyl]benzoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;5% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 1.90 Å
R-free 0.211
|
|
8BDE
Tubulin-baccatin III complex
Deposited 2022-10-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
R3Q [(1~{S},2~{S},3~{R},4~{S},7~{R},9~{S},10~{S},12~{R},15~{S})-4,12-diacetyloxy-10,14,16,16-tetramethyl-1,9,15-tris(oxidanyl)-11-oxidanylidene-6-oxatetracyclo[11.3.1.0^{3,10}.0^{4,7}]heptadec-13-en-2-yl] benzoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;2-4% PEG 4K, 2-10% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole
|
Resolution 1.90 Å
R-free 0.218
|
|
8BDF
Tubulin-taxane-2a complex
Deposited 2022-10-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
R42 [(1~{S},2~{S},3~{R},4~{S},7~{R},9~{S},10~{S},12~{R},15~{S})-4-acetyloxy-15-[(2~{R},3~{S})-3-[(4-methoxy-2-methylidene-4-oxidanylidene-butanoyl)amino]-2-oxidanyl-3-phenyl-propanoyl]oxy-10,14,16,16-tetramethyl-1,9,12-tris(oxidanyl)-11-oxidanylidene-6-oxatetracyclo[11.3.1.0^{3,10}.0^{4,7}]heptadec-13-en-2-yl] benzoate × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;2-4% PEG 4K, 2-10% glycerol, 30 mM MgCl2, 524 30 mM CaCl2, 0.1 M MES/Imidazole
|
Resolution 1.95 Å
R-free 0.216
|
|
8BDG
Tubulin-taxane-2b complex
Deposited 2022-10-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
R3T [(1~{S},2~{S},3~{R},4~{S},7~{R},9~{S},10~{S},12~{R},15~{S})-4-acetyloxy-15-[(2~{R},3~{S})-3-(2-bromanylethanoylamino)-2-oxidanyl-3-phenyl-propanoyl]oxy-10,14,16,16-tetramethyl-1,9,12-tris(oxidanyl)-11-oxidanylidene-6-oxatetracyclo[11.3.1.0^{3,10}.0^{4,7}]heptadec-13-en-2-yl] benzoate × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;2-4% PEG 4K, 2-10% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole
|
Resolution 2.35 Å
R-free 0.214
|
|
8C0F
Tubulin-PTC596 complex
Deposited 2022-12-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 5
SOZ 5-fluoranyl-2-(6-fluoranyl-2-methyl-benzimidazol-1-yl)-~{N}4-[4-(trifluoromethyl)phenyl]pyrimidine-4,6-diamine × 1
EDO 1,2-ETHANEDIOL × 1
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;3% PEG 4K, 3% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.10 Å
R-free 0.225
|
|
8CL9
Tubulin-DARPin D1 complex
Deposited 2023-02-16
|
Different construct
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 5.5;293 K;21% PEG3000 (w/v), 0.2 M Ammonium Sulfate, 0.1 M Bis-Tris Methane
|
Resolution 2.50 Å
R-free 0.241
|
|
8CLA
Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
Deposited 2023-02-16
|
Different construct
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
I8R 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 5.5;293 K;21% PEG3000 (w/v), 0.2M ammonium sulfate, 0.1M bis-tris methane
|
Resolution 2.00 Å
R-free 0.206
|
|
8CLB
Colchicine bound to tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 3.00 Å
R-free 0.214
|
|
8CLC
Tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
2–431(430 aa)
Chain D
2–431(430 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.70 Å
R-free 0.234
|
|
8CLD
Ansamitocin P3 bound to tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
BKF (1S,2S,3S,5S,6S,16Z,18Z,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 3.20 Å
R-free 0.241
|
|
8CLE
Vinblastine bound to tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 2
VLB (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 3.20 Å
R-free 0.248
|
|
8CLF
Z-SolQ2Br bound to tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
V1O 5-[[4-(2-bromoethyl)-3,5-dimethoxy-phenyl]diazenyl]-2-methoxy-phenol × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.70 Å
R-free 0.217
|
|
8CLG
Epothilone A and Colchicine bound to tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 4
EP EPOTHILONE A × 2
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
BATCH MODE;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.80 Å
R-free 0.227
|
|
8CLH
Drug cocktail (Colchicine, Epothilone A, Peloruside, Ansamitocin P3, Vinblastine) bound to tubulin (T2R-TTL) complex
Deposited 2023-02-16
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
2–431(430 aa)
Chain D
2–431(430 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 4
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
LOC N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide × 1
EP EPOTHILONE A × 2
POU Peloruside A × 1
VLB (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE × 1
BKF (1S,2S,3S,5S,6S,16Z,18Z,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
SMALL TUBES;pH 6.5;293 K;6% PEG4000 (w/v), 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.50 Å
R-free 0.239
|
|
8HUH
Crystal structure of T2R-TTL-3a complex
Deposited 2022-12-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
CA CALCIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
MXV 2-(1-methylindol-4-yl)-4-(3,4,5-trimethoxyphenyl)-1~{H}-imidazo[4,5-c]pyridine × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% polyethylene glycol 4000, 8% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.80 Å
R-free 0.266
|
|
8QEA
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 96 fs structure
Deposited 2023-08-31
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.232
|
|
8QL2
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: dark structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
MG MAGNESIUM ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
CA CALCIUM ION × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.70 Å
R-free 0.181
|
|
8QL3
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 233 fs structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.275
|
|
8QL4
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 349 fs structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.315
|
|
8QL5
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 1 ps structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.300
|
|
8QL6
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 25 ps structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.256
|
|
8QL7
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 35 ps structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.269
|
|
8QL8
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 125 ps structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.279
|
|
8QL9
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 1 ns structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.306
|
|
8QLA
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 10 ns structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
IBL Azo-Combretastatin A4 (cis) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.302
|
|
8QLB
Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution: 100 ns structure
Deposited 2023-09-19
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 1
CA CALCIUM ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 1
VYT Azo-Combretastatin A4 (trans) × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;293 K;0.2M Ammonium sulfate, 0.1M Bis/Tris-methane pH=5.5, 21% PEG 3000 (m/v)
|
Resolution 1.80 Å
R-free 0.299
|
|
8R67
tubulin-cryptophycin complex
Deposited 2023-11-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
IMD IMIDAZOLE × 5
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
Y74 2-[(3~{S},10~{R},13~{E},16~{S})-10-[(3-chloranyl-4-methoxy-phenyl)methyl]-6,6-dimethyl-2,5,9,12-tetrakis(oxidanylidene)-16-[(1~{S})-1-[(2~{R},3~{R})-3-phenyloxiran-2-yl]ethyl]-1,4-dioxa-8,11-diazacyclohexadec-13-en-3-yl]ethanoic acid × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;5% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.20 Å
R-free 0.229
|
|
8R6O
Tubulin-4AZA2996 complex
Deposited 2023-11-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
RME N6-(4-methylpyridin-2-yl)-N2-(2-morpholinoethyl)-3-nitropyridine-2,6-diamine × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.7;293 K;4% PEG 4K, 10% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole pH 6.7
|
Resolution 2.20 Å
R-free 0.233
|
|
8RIV
T2R-TTL-1-K08 complex
Deposited 2023-12-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1H01 (4-fluoranyl-2-methyl-1~{H}-indol-5-yl) 3,4,5-trimethoxybenzenesulfonate × 2
IMD IMIDAZOLE × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;4% PEG 4K, 9-10% glycerol, 30 mM MgCl2, 30 mM CaCl2, 5 mM tyrosine and 100 mM MES/Imidazole pH 6.5
|
Resolution 2.78 Å
R-free 0.231
|
|
8RIW
T2R-TTL-1-L01 complex
Deposited 2023-12-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
IMD IMIDAZOLE × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1H00 (2-methyl-1~{H}-indol-5-yl) 3,4,5-trimethoxybenzenesulfonate × 2
GOL GLYCEROL × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;4% PEG 4K, 9-10% glycerol, 30 mM MgCl2, 30 mM CaCl2, 5 mM tyrosine and 100 mM MES/Imidazole pH
6.5
|
Resolution 2.57 Å
R-free 0.228
|
|
9C13
XMAP215 TOG5 interaction with GMPCPP tubulin lattice
Deposited 2024-05-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 2
MG MAGNESIUM ION × 4
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.89 Å
|
|
9D2B
Symmetry-expanded reconstruction of augmin T-II bonsai on the microtubule
Deposited 2024-08-08
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.08 Å
|
|
9F8G
Photostatin (photoswitchable azo-combretastatin) Z-PST27 bound to tubulin-DARPin D1 complex
Deposited 2024-05-06
|
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
CA CALCIUM ION × 1
A1IBN 5-[(~{Z})-(3,5-diethyl-4-methoxy-phenyl)diazenyl]-2-methyl-phenol × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 5.5;293 K;21% PEG 3000 (w/v), 0.2 M ammonium sulfate and 0.1 M bis-tris methane
|
Resolution 2.20 Å
R-free 0.226
|
|
9FYD
tubulin - cryptophycin-uD[Dab] complex
Deposited 2024-07-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1IHR cryptophycin-uD[Dab] × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.5;293 K;5% PEG 4K, 8% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.236
|
|
9GMY
Tubulin in complex with an oxathiane analog of zampanolide
Deposited 2024-08-30
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 3
CL CHLORIDE ION × 1
GOL GLYCEROL × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1IM9 (2Z,4E)-N-[(S)-[(1R,2E,5S,8E,10Z,17S)-3,11-dimethyl-7,13-bis(oxidanylidene)-6,21-dioxa-19-thiabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl]-oxidanyl-methyl]hexa-2,4-dienamide × 2
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 6.7;289.15 K;0.1 M Mes/0.1M Imidazole, 0.03M CaCl2/MgCl2, 5 mM L-Tyr, 2.5% glycerol, 4.6% PEG4000
|
Resolution 1.97 Å
R-free 0.202
|
|
9GNU
Tubulin in complex with a dioxane analog of zampanolide
Deposited 2024-09-04
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
CL CHLORIDE ION × 1
GOL GLYCEROL × 3
GDP GUANOSINE-5'-DIPHOSPHATE × 1
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1IND (2Z,4E)-N-((S)-((1R,2E,5S,8E,10Z,14E,17S)-3,11-dimethyl-7,13-dioxo-6,19,21-trioxabicyclo[15.3.1]henicosa-2,8,10,14-tetraen-5-yl)(hydroxy)methyl)hexa-2,4-dienamide × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293.15 K;0.1 M Mes / 0.1 M Imidazole pH 6.5, 0.03 M CaCl2 / 0.03 M MgCl2, 5 mM L-Tyrosine, 8 % glycerol, 5.5 % PEG4000
|
Resolution 2.20 Å
R-free 0.206
|
|
9H1O
Cryo-EM structure of taxol-microtubules in complex with the C1 domain of GEFH1
Deposited 2024-10-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 7
PDB declaration: heptameric
|
Chain D
1–445(445 aa)
Chain E
1–445(445 aa)
Chain F
1–445(445 aa)
Chain G
1–445(445 aa)
|
Not recorded
|
ZN ZINC ION × 2
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
GDP GUANOSINE-5'-DIPHOSPHATE × 4
TA1 TAXOL × 4
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.9;BRB80 buffer
80mM PIPES, 1mM MgCl2, 1mM EGTA, pH 6.9
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.40 Å
|
|
9H31
T2R-TTL-PROTAC4 complex
Deposited 2024-10-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1ISE N-[5-(1-{2-[4-({[(1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl]oxy}carbonyl)phenyl]ethyl}-1H-1,2,3-triazol-4-yl)pentanoyl]-3-methyl-D-valyl-(4R)-4-hydroxy-N-{[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl}-L-prolinamide × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;4% PEG 4K, 14% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.20 Å
R-free 0.227
|
|
9H32
T2R-TTL-PROTAC3 complex
Deposited 2024-10-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1ISD (1S,2R,3S,5S,6S,16E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16-tetraen-6-yl 4-(2-{4-[4-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-4-yl}amino)-4-oxobutyl]-1H-1,2,3-triazol-1-yl}ethyl)benzoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;4% PEG 4K, 13% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.31 Å
R-free 0.235
|
|
9H33
T2R-TTL-PROTAC2 complex
Deposited 2024-10-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 1
A1ISC (1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 5-{1-[6-({(4R)-2-[(3R)-2,6-dioxopiperidin-3-yl]-1-oxo-2,4-dihydro-1H-isoindol-4-yl}amino)-6-oxohexyl]-1H-1,2,3-triazol-4-yl}pentanoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.5;293 K;4% PEG 4K, 13% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.228
|
|
9H34
T2R-TTL-PROTAC1 complex
Deposited 2024-10-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 5
CA CALCIUM ION × 4
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
GOL GLYCEROL × 2
A1ISB (1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 4-{2-[4-({2-[2-({2-[(3R)-2,6-dioxopiperidin-3-yl]-1,3-dioxo-2,3-dihydro-1H-isoindol-4-yl}amino)ethoxy]ethoxy}methyl)-1H-1,2,3-triazol-1-yl]ethyl}benzoate × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;293 K;4% PEG 4K, 13% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine
|
Resolution 2.30 Å
R-free 0.252
|
|
9K7E
Crystal structure of T2R-TTL-taccalonolide Y8 complex
Deposited 2024-10-23
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–431(431 aa)
Chain D
1–431(431 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
CA CALCIUM ION × 2
MG MAGNESIUM ION × 3
A1EE1 (4~{R})-5-(4-hydroxyphenyl)-3-(4-methylphenyl)-4-phenyl-2,4-dihydropyrrolo[3,4-c]pyrazol-6-one × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 2
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% PEG, 5% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.45 Å
R-free 0.267
|
|
9LNL
Crystal structure of T2R-TTL-YQVB15 complex
Deposited 2025-01-21
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
CA CALCIUM ION × 2
MG MAGNESIUM ION × 2
A1EPQ 10',11'-difluoro-12'-methoxyvinblastine × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;6% PEG, 5% glycerol, 0.1 M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7
|
Resolution 2.85 Å
R-free 0.277
|
|
9OLH
Symmetry-expanded reconstruction of augmin T-II bonsai on the GTPgammaS microtubule
Deposited 2025-05-12
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 3
GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.83 Å
|
|
9QFN
Crystal structure of T2R-TTL-Li5 complex
Deposited 2025-03-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain B
1–445(445 aa)
Chain D
1–445(445 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 7
GOL GLYCEROL × 3
CA CALCIUM ION × 3
CL CHLORIDE ION × 1
GDP GUANOSINE-5'-DIPHOSPHATE × 2
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
A1I6L (5~{S},7~{S})-5-(4-methoxyphenyl)-7-(3,4,5-trimethoxyphenyl)-4,5,6,7-tetrahydro-[1,2,4]triazolo[1,5-a]pyrimidine × 1
IMD IMIDAZOLE × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;295 K;0.1M Mes/0.1M imidazole pH 6.5, 0.03M CaCl2/0.03M MgCl2, 5 mM L-tyrosine, 8.8% glycerol, 5.5% PEG4000
|
Resolution 2.25 Å
R-free 0.258
|
|
9T17
Cryo-EM reconstruction of the Kinesin KIF5A motor domain decorated GMPCPP microtubule
Deposited 2025-10-21
|
Different construct
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 3
PDB declaration: trimeric
|
Chain B
1–427(427 aa)
|
Not recorded
|
GTP GUANOSINE-5'-TRIPHOSPHATE × 1
MG MAGNESIUM ION × 2
G2P PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER × 1
ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 6.8
cryo-EM vitrification conditions
Cryogen ETHANE-PROPANE
|
Resolution 2.77 Å
|