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6odf

EEEV glycoproteins bound with heparan sulfate

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

E1

Eastern equine encephalitis virus

UniProt E9KXM2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 480 其他Polymer 360 E2 × 240 （E9KXL2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 360 Consistent with protein count
2 Other combination Heteromer Protein 8 其他Polymer 6 E2 × 4 （E9KXL2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 6 Consistent with protein count
3 Other combination Heteromer Protein 40 其他Polymer 30 E2 × 20 （E9KXL2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 30 Consistent with protein count
4 Other combination Heteromer Protein 48 其他Polymer 36 E2 × 24 （E9KXL2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 36 Consistent with protein count
5 Other combination Heteromer Protein 8 其他Polymer 6 E2 × 4 （E9KXL2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 6 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
6mui 6mui 6mui 6mui 6mui 6mw9 6mw9 6mw9 6mw9 6mw9 6mwc 6mwc

38 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name E9KXM2_EEEV
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–441； UniProt 802–1242 Author chain C； PDBConstruct 1–441； UniProt 802–1242 Author chain E； PDBConstruct 1–441； UniProt 802–1242 Author chain G； PDBConstruct 1–441； UniProt 802–1242

E2

Eastern equine encephalitis virus

UniProt E9KXL2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 480 其他Polymer 360 E1 × 240 （E9KXM2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 360 Consistent with protein count
2 Other combination Heteromer Protein 8 其他Polymer 6 E1 × 4 （E9KXM2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 6 Consistent with protein count
3 Other combination Heteromer Protein 40 其他Polymer 30 E1 × 20 （E9KXM2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 30 Consistent with protein count
4 Other combination Heteromer Protein 48 其他Polymer 36 E1 × 24 （E9KXM2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 36 Consistent with protein count
5 Other combination Heteromer Protein 8 其他Polymer 6 E1 × 4 （E9KXM2） ;2-O-sulfo-beta-L-galactopyranuronic acid-(1-4)-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(sulfooxy)tetrahydro-2H-pyran-3-yl]sulfamic acid ; × 6 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
6mui 6mui 6mui 6mui 6mui 6mw9 6mw9 6mw9 6mw9 6mw9 6mwc 6mwc

39 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name E9KXL2_EEEV
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B； PDBConstruct 1–420； UniProt 325–744 Author chain D； PDBConstruct 1–420； UniProt 325–744 Author chain F； PDBConstruct 1–420； UniProt 325–744 Author chain H； PDBConstruct 1–420； UniProt 325–744

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6odf
Deposition date deposition_date2019-03-26
Structure title titleEEEV glycoproteins bound with heparan sulfate
Keywords keywordsEEEV, VIRUS; VIRUS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6odf__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6odf__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 108 109 1010 1011 1012 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6odf__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)280.10 Å
Total Rg280.20 Å
Atom count1590720
Residues203760
Excluded volume28222000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6odf__assembly_1__model_1 480-meric （480） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 6odf__assembly_2__model_1 octameric （8） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 6odf__assembly_3__model_1 40-meric （40） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 6odf__assembly_4__model_1 48-meric （48） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 6odf__assembly_5__model_1 octameric （8） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)