6qg1

Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 2)

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Translation initiation factor eIF-2B subunit alpha

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P14741

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EI2BA_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–305; UniProt 1–305 Author chain B; PDBConstruct 1–305; UniProt 1–305

Translation initiation factor eIF-2B subunit beta

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32502

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EI2BB_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–381; UniProt 1–381 Author chain D; PDBConstruct 1–381; UniProt 1–381

Translation initiation factor eIF-2B subunit gamma

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P09032

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EI2BG_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain E; PDBConstruct 1–578; UniProt 1–578 Author chain F; PDBConstruct 1–578; UniProt 1–578

Translation initiation factor eIF-2B subunit delta

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P12754

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EI2BD_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain G; PDBConstruct 1–651; UniProt 1–651 Author chain H; PDBConstruct 1–651; UniProt 1–651

Translation initiation factor eIF-2B subunit epsilon

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32501

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name EI2BE_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain I; PDBConstruct 1–712; UniProt 1–712 Author chain J; PDBConstruct 1–712; UniProt 1–712

Eukaryotic translation initiation factor 2 subunit alpha

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P20459

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IF2A_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain K; PDBConstruct 1–304; UniProt 1–304 Author chain L; PDBConstruct 1–304; UniProt 1–304

Eukaryotic translation initiation factor 2 subunit gamma

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32481

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit beta × 2 (P09064) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IF2G_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain M; PDBConstruct 1–527; UniProt 1–527 Author chain N; PDBConstruct 1–527; UniProt 1–527

Eukaryotic translation initiation factor 2 subunit beta

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P09064

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Translation initiation factor eIF-2B subunit alpha × 2 (P14741) Translation initiation factor eIF-2B subunit beta × 2 (P32502) Translation initiation factor eIF-2B subunit gamma × 2 (P09032) Translation initiation factor eIF-2B subunit delta × 2 (P12754) Translation initiation factor eIF-2B subunit epsilon × 2 (P32501) Eukaryotic translation initiation factor 2 subunit alpha × 2 (P20459) Eukaryotic translation initiation factor 2 subunit gamma × 2 (P32481) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IF2B_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain O; PDBConstruct 1–285; UniProt 1–285 Author chain P; PDBConstruct 1–285; UniProt 1–285

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id6qg1
Deposition date deposition_date2019-01-10
Structure title titleStructure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 2)
Keywords keywordsintegrated stress response, ISR, translation, initiation factors, phosphorylation, eIF2, eIF2B, tRNAi, GEF, heat domain, eIF2 alpha; TRANSLATION
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6qg1__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6qg1__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6qg1__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)69.01 Å
Rg (electron density)69.87 Å
Total Rg69.94 Å
Atom count36980
Residues4740
Excluded volume663160 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6qg1__assembly_1__model_1 hexadecameric (16) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (8)

▶

7. Citations (1)