|
2LAH
Solution NMR Structure of Mitotic checkpoint serine/threonine-protein kinase BUB1 N-terminal domain from Homo sapiens, Northeast Structural Genomics Consortium Target HR5460A (Methods Development)
Deposited 2011-03-14
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–150(150 aa)
Fragment:N-terminal domain
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 7.5;298 K;Pressure ambient
NMR sample composition
1.164 mM [U-100% 13C; U-100% 15N] HR5460A, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition
1.033 mM [U-10% 13C; U-100% 15N] HR5460A, 95% H2O/5% D2O | 95% H2O/5% D2O
|
Resolution not provided
|
|
4A1G
The crystal structure of the human Bub1 TPR domain in complex with the KI motif of Knl1
Deposited 2011-09-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–150(150 aa)
Fragment:TPR DOMAIN, RESIDUES 1-150
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;1.25-1.3 M NA MALONATE, PH 6.0.
|
Resolution 2.60 Å
R-free 0.244
|
|
4A1G
The crystal structure of the human Bub1 TPR domain in complex with the KI motif of Knl1
Deposited 2011-09-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain B
1–150(150 aa)
Fragment:TPR DOMAIN, RESIDUES 1-150
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;1.25-1.3 M NA MALONATE, PH 6.0.
|
Resolution 2.60 Å
R-free 0.244
|
|
4A1G
The crystal structure of the human Bub1 TPR domain in complex with the KI motif of Knl1
Deposited 2011-09-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain C
1–150(150 aa)
Fragment:TPR DOMAIN, RESIDUES 1-150
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;1.25-1.3 M NA MALONATE, PH 6.0.
|
Resolution 2.60 Å
R-free 0.244
|
|
4A1G
The crystal structure of the human Bub1 TPR domain in complex with the KI motif of Knl1
Deposited 2011-09-15
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain D
1–150(150 aa)
Fragment:TPR DOMAIN, RESIDUES 1-150
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 6;1.25-1.3 M NA MALONATE, PH 6.0.
|
Resolution 2.60 Å
R-free 0.244
|
|
4QPM
Structure of Bub1 kinase domain
Deposited 2014-06-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
749–1094(346 aa)
Fragment:UNP residues 749-1094
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
CL CHLORIDE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 7;293 K;20% PEG3350, 1% Tryptone, 10 mM DTT, 0.1 M HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.20 Å
R-free 0.269
|
|
4QPM
Structure of Bub1 kinase domain
Deposited 2014-06-24
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
749–1094(346 aa)
Fragment:UNP residues 749-1094
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
CL CHLORIDE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
pH 7;293 K;20% PEG3350, 1% Tryptone, 10 mM DTT, 0.1 M HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.20 Å
R-free 0.269
|
|
4R8Q
Structure and substrate recruitment of the human spindle checkpoint kinase bub1
Deposited 2014-09-02
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
724–1085(362 aa)
Fragment:Kinase domain, unp residues 724-1085
|
Not recorded
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6.29;293 K;TO 15 MG/ML BUB1, ATP WAS ADDED TO A FINAL CONCENTRATION OF 10 MM. SITTING DROPS WERE MADE BY MIXING 1.5 MICROLITERS PROTEIN WITH 1.5 MICROLITERS CRYSTALLIZATION SOLUTION (20% W/V PEG 3350, 0.1 M SODIUM FORMATE PH 6.29, 25 MM DTT) AND EQUILIBRATING AGAINST 200 MICROLITERS OF RESERVOIR SOLUTION. LARGE SINGLE CRYSTALS WERE OBTAINED BY REPEATED SEEDING. THE CRYSTALS WERE CRYO-PROTECTED IN RESERVOIR SOLUTION SUPPLEMENTED WITH 18% V/V GLYCEROL AND THEN FLASH-COOLED IN LIQUID PROPANE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K, vapor diffusion, sitting drop
|
Resolution 2.31 Å
R-free 0.264
|
|
5DMZ
Structure of human Bub1 kinase domain phosphorylated at Ser969
Deposited 2015-09-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
726–1085(360 aa)
Fragment:UNP residues 726-1085
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.6;277 K;0.2 M NaCl, 15% PEG 3350
|
Resolution 2.40 Å
R-free 0.245
|
|
5DMZ
Structure of human Bub1 kinase domain phosphorylated at Ser969
Deposited 2015-09-09
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain B
726–1085(360 aa)
Fragment:UNP residues 726-1085
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
ADP ADENOSINE-5'-DIPHOSPHATE × 1
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7.6;277 K;0.2 M NaCl, 15% PEG 3350
|
Resolution 2.40 Å
R-free 0.245
|
|
6F7B
Crystal structure of the human Bub1 kinase domain in complex with BAY 1816032
Deposited 2017-12-08
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
726–1085(360 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
CVQ 2-[3,5-bis(fluoranyl)-4-[[3-[5-methoxy-4-[(3-methoxypyridin-4-yl)amino]pyrimidin-2-yl]indazol-1-yl]methyl]phenoxy]ethanol × 1
MG MAGNESIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION;pH 7.26;277 K;200mM MgCl2, 100mM Tris-HCl pH 7.26, 5% glycerol, 20% PEG 3350
|
Resolution 2.00 Å
R-free 0.254
|
|
7B1F
Orthorhombic P212121 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Deposited 2020-11-24
|
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain C
455–479(25 aa)
Chain D
455–479(25 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;20% PEG 4000, 0.1 M Hepes pH 7.5, 10% isopropanol
|
Resolution 1.75 Å
R-free 0.287
|
|
7B1J
Orthorhombic P21212 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Deposited 2020-11-25
|
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain C
455–479(25 aa)
Chain D
455–479(25 aa)
|
Non-standard monomer:Yes (specific site not provided by mmCIF)
Non-standard monomer:Yes (specific site not provided by mmCIF)
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;10% Isopropanol, 0.1 M Na HEPES, pH 7.5, 20% PEG 4000
|
Resolution 2.90 Å
R-free 0.296
|