|
5C8H
Crystal structure of ORC2 C-terminal domain
Deposited 2015-06-25
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
458–577(120 aa)
Fragment:C-terminal domain (UNP residues 458-577)
|
Not recorded
|
UNX UNKNOWN LIGAND × 3
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;293 K;20% PEG-3350, 0.2 M magnesium formate
|
Resolution 2.01 Å
R-free 0.257
|
|
5UJ8
Human Origin Recognition Complex subunits 2 and 3
Deposited 2017-01-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain G
231–577(347 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;290 K;9.5% PEG20000
50mM tri-Sodium-citrate
60mM Citric Acid
10mg/ml HO23
Ratio 1:1
|
Resolution 6.00 Å
R-free 0.368
|
|
5UJ8
Human Origin Recognition Complex subunits 2 and 3
Deposited 2017-01-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain E
231–577(347 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;290 K;9.5% PEG20000
50mM tri-Sodium-citrate
60mM Citric Acid
10mg/ml HO23
Ratio 1:1
|
Resolution 6.00 Å
R-free 0.368
|
|
5UJ8
Human Origin Recognition Complex subunits 2 and 3
Deposited 2017-01-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 3
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain H
231–577(347 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;290 K;9.5% PEG20000
50mM tri-Sodium-citrate
60mM Citric Acid
10mg/ml HO23
Ratio 1:1
|
Resolution 6.00 Å
R-free 0.368
|
|
5UJ8
Human Origin Recognition Complex subunits 2 and 3
Deposited 2017-01-17
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 4
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain F
231–577(347 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;290 K;9.5% PEG20000
50mM tri-Sodium-citrate
60mM Citric Acid
10mg/ml HO23
Ratio 1:1
|
Resolution 6.00 Å
R-free 0.368
|
|
5UJ8
Human Origin Recognition Complex subunits 2 and 3
Deposited 2017-01-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 5
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain G
231–577(347 aa)
Chain H
231–577(347 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;290 K;9.5% PEG20000
50mM tri-Sodium-citrate
60mM Citric Acid
10mg/ml HO23
Ratio 1:1
|
Resolution 6.00 Å
R-free 0.368
|
|
5UJ8
Human Origin Recognition Complex subunits 2 and 3
Deposited 2017-01-17
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 6
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain E
231–577(347 aa)
Chain F
231–577(347 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;290 K;9.5% PEG20000
50mM tri-Sodium-citrate
60mM Citric Acid
10mg/ml HO23
Ratio 1:1
|
Resolution 6.00 Å
R-free 0.368
|
|
5UJM
Structure of the active form of human Origin Recognition Complex and its ATPase motor module
Deposited 2017-01-18
|
Different construct
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
231–577(347 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 18.00 Å
|
|
7CTE
Human Origin Recognition Complex, ORC2-5
Deposited 2020-08-18
|
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.6
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
7CTF
Human origin recognition complex 1-5 State II
Deposited 2020-08-18
|
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.6
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.80 Å
|
|
7CTG
Human Origin Recognition Complex, ORC1-5 State I
Deposited 2020-08-18
|
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.6
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.00 Å
|
|
7JPO
ORC-O1AAA: Human Origin Recognition Complex (ORC) with dynamic/unresolved ORC2 WH
Deposited 2020-08-09
|
Different oligomeric state
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 3
K POTASSIUM ION × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.20 Å
|
|
7JPP
ORC-O2WH: Human Origin Recognition Complex (ORC) with dynamic/unresolved ORC1 AAA+ domain
Deposited 2020-08-09
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.70 Å
|
|
7JPQ
ORC-O2-5: Human Origin Recognition Complex (ORC) with subunits 2,3,4,5
Deposited 2020-08-09
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 2
MG MAGNESIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å
|
|
7JPR
ORC-OPEN: Human Origin Recognition Complex (ORC) in an open conformation
Deposited 2020-08-09
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
ATP ADENOSINE-5'-TRIPHOSPHATE × 3
MG MAGNESIUM ION × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.00 Å
|
|
8RWV
Human OCCM DNA licensing intermediate
Deposited 2024-02-05
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein–DNA
Heteromer;Protein × 12
PDB declaration: 14-meric
|
Chain B
1–577(577 aa)
|
Not recorded
|
No recorded non-water small molecule
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.68 Å
|
|
8S0C
H. sapiens ORC1-5 bound to double stranded DNA as part of the MCM-ORC complex
Deposited 2024-02-13
|
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein–DNA
Heteromer;Protein × 5
PDB declaration: heptameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER × 2
MG MAGNESIUM ION × 2
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.00 Å
|
|
8S0D
H. sapiens MCM bound to double stranded DNA and ORC1-6
Deposited 2024-02-13
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein–DNA
Heteromer;Protein × 12
PDB declaration: tetradecameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER × 5
MG MAGNESIUM ION × 8
ZN ZINC ION × 5
ADP ADENOSINE-5'-DIPHOSPHATE × 3
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.60 Å
|
|
8S0E
H. sapiens OCCM bound to double stranded DNA
Deposited 2024-02-13
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein–DNA
Heteromer;Protein × 13
PDB declaration: pentadecameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER × 5
MG MAGNESIUM ION × 5
ZN ZINC ION × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.80 Å
|
|
8S0F
H. sapiens OC1M bound to double stranded DNA
Deposited 2024-02-13
|
Different oligomeric state
Different ligand/ion
Different structure-quality metrics
|
Assembly 1
Protein–DNA
Heteromer;Protein × 12
PDB declaration: tetradecameric
|
Chain B
1–577(577 aa)
|
Not recorded
|
MG MAGNESIUM ION × 5
ZN ZINC ION × 1
AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER × 5
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.10 Å
|