7nht

Akirin2 bound human proteasome

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Proteasome subunit alpha type-2

OrganismNot specified

UniProt P25787

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA2_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–234; UniProt 1–234

Proteasome subunit alpha type-4

OrganismNot specified

UniProt P25789

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA4_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–261; UniProt 1–261

Proteasome subunit alpha type-7

OrganismNot specified

UniProt O14818

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA7_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–248; UniProt 1–248

Proteasome subunit alpha type-5

OrganismNot specified

UniProt P28066

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA5_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–241; UniProt 1–241

Proteasome subunit alpha type-1

OrganismNot specified

UniProt P25786

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA1_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–263; UniProt 1–263

Proteasome subunit alpha type-3

OrganismNot specified

UniProt P25788

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA3_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–255; UniProt 1–255

Proteasome subunit alpha type-6

OrganismNot specified

UniProt P60900

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSA6_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–246; UniProt 1–246

Proteasome subunit beta type-7

OrganismNot specified

UniProt Q99436

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB7_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H; PDBConstruct 1–277; UniProt 1–277

Proteasome subunit beta type-3

OrganismNot specified

UniProt P49720

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB3_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain I; PDBConstruct 1–205; UniProt 1–205

Proteasome subunit beta type-2

OrganismNot specified

UniProt P49721

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB2_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain J; PDBConstruct 1–201; UniProt 1–201

Proteasome subunit beta type-5

OrganismNot specified

UniProt P28074

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB5_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain K; PDBConstruct 1–263; UniProt 1–263

Proteasome subunit beta type-1

OrganismNot specified

UniProt P20618

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB1_HUMAN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain L; PDBConstruct 1–241; UniProt 1–241

Proteasome subunit beta type-4

OrganismNot specified

UniProt P28070

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-6 × 1 (P28072) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB4_HUMAN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain M; PDBConstruct 1–264; UniProt 1–264

Proteasome subunit beta type-6

OrganismNot specified

UniProt P28072

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Akirin-2 × 2 (Q53H80) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSB6_HUMAN
Isoform —
PDB entities 14
Chains and sequence ranges Author chain N; PDBConstruct 1–239; UniProt 1–239

Akirin-2

Homo sapiens

UniProt Q53H80

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Proteasome subunit alpha type-2 × 1 (P25787) Proteasome subunit alpha type-4 × 1 (P25789) Proteasome subunit alpha type-7 × 1 (O14818) Proteasome subunit alpha type-5 × 1 (P28066) Proteasome subunit alpha type-1 × 1 (P25786) Proteasome subunit alpha type-3 × 1 (P25788) Proteasome subunit alpha type-6 × 1 (P60900) Proteasome subunit beta type-7 × 1 (Q99436) Proteasome subunit beta type-3 × 1 (P49720) Proteasome subunit beta type-2 × 1 (P49721) Proteasome subunit beta type-5 × 1 (P28074) Proteasome subunit beta type-1 × 1 (P20618) Proteasome subunit beta type-4 × 1 (P28070) Proteasome subunit beta type-6 × 1 (P28072) POTASSIUM ION × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name AKIR2_HUMAN
Isoform —
PDB entities 15
Chains and sequence ranges Author chain c; PDBConstruct 1–203; UniProt 1–203 Author chain d; PDBConstruct 1–203; UniProt 1–203

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7nht
Deposition date deposition_date2021-02-11
Structure title titleAkirin2 bound human proteasome
Keywords keywordsproteasome, nuclear import, TRANSPORT PROTEIN; TRANSPORT PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7nht__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7nht__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7nht__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)46.07 Å
Rg (electron density)45.27 Å
Total Rg45.66 Å
Atom count24915
Residues3222
Excluded volume444070 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7nht__assembly_1__model_1 hexadecameric (16) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (16)

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6. Fold Classification (SCOP + CATH) 5 domains

CATH v4.4 (5 domains)

Domain ID domain_id7nhtA01
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id7nhtB01
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id7nhtC01
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id7nhtD01
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
Domain ID domain_id7nhtH01
Class class3 — Alpha Beta
Architecture architecture60 — 4-Layer Sandwich
Topology topology20 — Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
Homologous superfamily homologous superfamily10 — Aminohydrolase, N-terminal nucleophile (Ntn) domain
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7. Citations (1)