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7p5g

NMR structure of a peptide deriving from SARS-CoV-2 S RBD 482-506 fragment in HFIP/H2O

Method: SOLUTION NMR
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Spike glycoprotein

OrganismNot specified

UniProt P0DTC2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 No other associated polymer Consistent with protein count

Other States of the Same Protein in the Database

Monomer
7b62 7fg7 7my8 7p5g 7p5q 7p5s 7r95 7tpk 7v22 7xiz 9n2l 9wsp

12 assemblies

Homodimer
7wxz 7wxz 7y9n 7zr2

4 assemblies

Homotetramer
6lvn 7owx

2 assemblies

Other homooligomers
6lxt 6lxt 6m1v 6x29 6x2a 6x2b 6x2c 6x45 6xs6 6zgg 6zgh 7a93

103 assemblies; showing the first 12

Heteromeric or nucleic-acid complex
10mu 11hk 11hl 11hn 11hw 6lzg 6m0j 6m17 6vsb 6vw1 6vw1 6vxx

2353 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name SPIKE_SARS2
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–25； UniProt 482–506

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7p5g
Deposition date deposition_date2021-07-14
Structure title titleNMR structure of a peptide deriving from SARS-CoV-2 S RBD 482-506 fragment in HFIP/H2O
Keywords keywordsSARS-CoV-2, mimicking peptides, Spike, Receptor Binding Domain, Covid-19, ANTIVIRAL PROTEIN; ANTIVIRAL PROTEIN
Experimental Method methodSOLUTION NMR
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7p5g__assembly_1__model_8

Assembly 1 · Model 8 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7p5g__assembly_1__model_8 | I(q)

10-2 10-1 104 105 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7p5g__assembly_1__model_8 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）12.10 Å
Rg (electron density)11.25 Å
Total Rg12.50 Å
Atom count367
Residues25
Excluded volume3426 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7p5g__assembly_1__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 2 7p5g__assembly_1__model_2 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 3 7p5g__assembly_1__model_3 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 4 7p5g__assembly_1__model_4 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 5 7p5g__assembly_1__model_5 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 6 7p5g__assembly_1__model_6 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 7 7p5g__assembly_1__model_7 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 8 7p5g__assembly_1__model_8 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 9 7p5g__assembly_1__model_9 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 10 7p5g__assembly_1__model_10 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 11 7p5g__assembly_1__model_11 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 12 7p5g__assembly_1__model_12 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 13 7p5g__assembly_1__model_13 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 14 7p5g__assembly_1__model_14 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 15 7p5g__assembly_1__model_15 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 16 7p5g__assembly_1__model_16 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 17 7p5g__assembly_1__model_17 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 18 7p5g__assembly_1__model_18 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 19 7p5g__assembly_1__model_19 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 20 7p5g__assembly_1__model_20 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 21 7p5g__assembly_1__model_21 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 22 7p5g__assembly_1__model_22 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 23 7p5g__assembly_1__model_23 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 24 7p5g__assembly_1__model_24 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 25 7p5g__assembly_1__model_25 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 26 7p5g__assembly_1__model_26 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 27 7p5g__assembly_1__model_27 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 28 7p5g__assembly_1__model_28 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 29 7p5g__assembly_1__model_29 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 30 7p5g__assembly_1__model_30 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 31 7p5g__assembly_1__model_31 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 32 7p5g__assembly_1__model_32 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 33 7p5g__assembly_1__model_33 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 34 7p5g__assembly_1__model_34 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 35 7p5g__assembly_1__model_35 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 36 7p5g__assembly_1__model_36 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 37 7p5g__assembly_1__model_37 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
1 38 7p5g__assembly_1__model_38 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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7. Citations (1)