7xez

NMR solution structures of p300 TAZ2 domain in complex with BRD4-NUT F1c domain binding motif #2

Method: SOLUTION NMR Dmax: 64.7 Å Quality: REASONABLE

1. Protein Identity and Related Structures Protein Identity & Related Structures

Histone acetyltransferase p300,NUT family member 1

Homo sapiens

UniProt Q09472

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 1723–1812 Mutation:C1738A, C1746A, C1789A, C1790A ZN ZINC ION × 3 SOLUTION NMR NMR measurement conditions:pH 6.3;298 K;Pressure 1 NMR sample composition:0.5 mM [U-100% 13C; U-100% 15N] p300 TAZ2 domain in fusion with BRD4-NUT F1c domain binding motif #2, 200 mM sodium phosphate, 3 mM [U-100% 2H] DTT, 90% H2O/10% D2O | 90% H2O/10% D2O NMR sample composition:0.5 mM [U-100% 13C; U-100% 15N] p300 TAZ2 domain in fusion with BRD4-NUT F1c domain binding motif #2, 200 mM sodium phosphate, 3 mM [U-100% 2H] DTT, 100% D2O | 100% D2O Resolution not provided

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

58 other PDB entries and 92 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name EP300_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 5–94; UniProt 1723–1812

Histone acetyltransferase p300,NUT family member 1

Homo sapiens

UniProt Q86Y26

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Monomer Protein × 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 419–470 Mutation:C1738A, C1746A, C1789A, C1790A ZN ZINC ION × 3 SOLUTION NMR NMR measurement conditions:pH 6.3;298 K;Pressure 1 NMR sample composition:0.5 mM [U-100% 13C; U-100% 15N] p300 TAZ2 domain in fusion with BRD4-NUT F1c domain binding motif #2, 200 mM sodium phosphate, 3 mM [U-100% 2H] DTT, 90% H2O/10% D2O | 90% H2O/10% D2O NMR sample composition:0.5 mM [U-100% 13C; U-100% 15N] p300 TAZ2 domain in fusion with BRD4-NUT F1c domain binding motif #2, 200 mM sodium phosphate, 3 mM [U-100% 2H] DTT, 100% D2O | 100% D2O Resolution not provided

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

1 other PDB entries and 1 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name NUTM1_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 112–163; UniProt 419–470

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 7xez

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 7xez
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2. Structure Basics 2. Structure Basics

Entry ID entry_id7xez
Deposition date deposition_date2022-03-31
Structure title titleNMR solution structures of p300 TAZ2 domain in complex with BRD4-NUT F1c domain binding motif #2
Keywords keywordsBRD4-NUT fusion protein, CBP/p300, TAZ2 domain, F1c domain, NUT carcinoma, PEPTIDE BINDING PROTEIN, TRANSFERASE; TRANSFERASE
Experimental Method methodSOLUTION NMR

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier17.01
Radius of gyration Rg (electron density) rg_electron16.42
Forward intensity I(0) i01982550000.00
Molecular weight molecular_weight351080.0 kDa
Excluded volume excluded_volume430000 ų
Envelope volume envelope_volume60138 ų
Hydration-shell volume shell_volume23268 ų
Envelope diameter envelope_diameter71.3
Shell Rg shell_rg28.66
Envelope Rg envelope_rg22.35
Shape Rg shape_rg16.41
Total Rg total_rg16.68
Total atoms total_atoms48960
Residues n_residues3260
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax64.7
Rg (real space) rg_real17.01
Rg uncertainty (real space) rg_real_error0.51
I(0) (real space) i0_real1.9830e+09
I(0) uncertainty (real space) i0_real_error2.5580e+07
Rg (reciprocal space) rg_reciprocal17.01
I(0) (reciprocal space) i0_reciprocal1983000000.0000
Solution quality estimate total_estimate0.7262
Solution quality rating solution_quality REASONABLE a REASONABLE solution
P(r) peaks n_peaks3
Primary peak position r_peak_primary21.3
Skewness Skewness skewness0.408
Kurtosis Kurtosis kurtosis0.100
Angular range angular_range— – 0.4700 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha673500.0000
Real-space data points n_real_points77
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.516; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.888; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (2)

8. Citations (1)

9. Files and Curves (10)