← Back to search
8if6

Conformational Dynamics of the D53-D3-D14 Complex in Strigolactone Signaling

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

F-box/LRR-repeat MAX2 homolog

Oryza sativa subsp. japonica

UniProt Q5VMP0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 3 Strigolactone esterase D14 × 1 （Q10QA5） SKP1-like protein 20 × 1 （Q651E8） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
5hyw 5hyw 5hzg 5hzg 6bro 6bro 6brp 6brp 6brq 6brq 7sa1 7sa1

13 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name MAX2_ORYSJ
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–720； UniProt 1–720

Strigolactone esterase D14

Oryza sativa subsp. japonica

UniProt Q10QA5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 3 F-box/LRR-repeat MAX2 homolog × 1 （Q5VMP0） SKP1-like protein 20 × 1 （Q651E8） Consistent with protein count

Other States of the Same Protein in the Database

Monomer
3vxk 3vxk 3w04 3w04 3w05 3w05 3wio 3wio 4ih9 4ih9 4iha 4iha

26 assemblies; showing the first 12

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
8if6 9mb8

2 assemblies

View Construct and Data Evidence
UniProt name D14_ORYSJ
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C； PDBConstruct 1–318； UniProt 1–318

SKP1-like protein 20

Oryza sativa subsp. japonica

UniProt Q651E8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 3 F-box/LRR-repeat MAX2 homolog × 1 （Q5VMP0） Strigolactone esterase D14 × 1 （Q10QA5） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
8if6

1 assemblies

View Construct and Data Evidence
UniProt name SKP20_ORYSJ
Isoform —
PDB entities 3
Chains and sequence ranges Author chain B； PDBConstruct 1–175； UniProt 1–175

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id8if6
Deposition date deposition_date2023-02-17
Structure title titleConformational Dynamics of the D53-D3-D14 Complex in Strigolactone Signaling
Keywords keywordsD14 D3 D53 SL, PLANT PROTEIN; PLANT PROTEIN
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8if6__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8if6__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8if6__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）36.18 Å
Rg (electron density)35.67 Å
Total Rg36.21 Å
Atom count8690
Residues1126
Excluded volume154760 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8if6__assembly_1__model_1 trimeric （3） Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (3)

▶

7. Citations (1)