8ioj

The Rubisco assembly intermidiate of Rubisco large subunit (RbcL) and Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1)

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Ribulose bisphosphate carboxylase large chain

Synechococcus elongatus PCC 6301

UniProt P00880

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 Rubisco accumulation factor 1.2, chloroplastic × 3 (Q9SR19) Rubisco accumulation factor 1.2, chloroplastic × 4 (Q9SR19) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RBL_SYNP6
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–472; UniProt 1–472 Author chain B; PDBConstruct 1–472; UniProt 1–472 Author chain C; PDBConstruct 1–472; UniProt 1–472 Author chain D; PDBConstruct 1–472; UniProt 1–472 Author chain H; PDBConstruct 1–472; UniProt 1–472 Author chain I; PDBConstruct 1–472; UniProt 1–472 Author chain J; PDBConstruct 1–472; UniProt 1–472 Author chain K; PDBConstruct 1–472; UniProt 1–472

Rubisco accumulation factor 1.2, chloroplastic

Arabidopsis thaliana

UniProt Q9SR19

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 Ribulose bisphosphate carboxylase large chain × 8 (P00880) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RAF2_ARATH
Isoform —
PDB entities 2, 3
Chains and sequence ranges Author chain E; PDBConstruct 1–203; UniProt 62–264 Author chain F; PDBConstruct 1–203; UniProt 62–264 Author chain G; PDBConstruct 1–203; UniProt 62–264 Author chain L; PDBConstruct 1–151; UniProt 287–437 Author chain M; PDBConstruct 1–151; UniProt 287–437 Author chain N; PDBConstruct 1–151; UniProt 287–437 Author chain O; PDBConstruct 1–151; UniProt 287–437

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8ioj
Deposition date deposition_date2023-03-11
Structure title titleThe Rubisco assembly intermidiate of Rubisco large subunit (RbcL) and Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1)
Keywords keywordsRubisco assembly intermidiate, CHAPERONE, LYASE-CHAPERONE complex; LYASE/CHAPERONE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8ioj__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8ioj__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8ioj__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)52.34 Å
Rg (electron density)52.06 Å
Total Rg52.23 Å
Atom count34796
Residues4454
Excluded volume617370 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8ioj__assembly_1__model_1 pentadecameric (15) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)