8jsh

Structure of the 30S-body-IF3 complex from Escherichia coli

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

30S ribosomal protein S18

OrganismNot specified

UniProt P0A7T7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS18_ECOLI
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 1; PDBConstruct 1–75; UniProt 1–75

30S ribosomal protein S21

OrganismNot specified

UniProt P68679

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS21_ECOLI
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 2; PDBConstruct 1–71; UniProt 1–71

30S ribosomal protein S20

OrganismNot specified

UniProt P0A7U7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS20_ECOLI
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 3; PDBConstruct 1–87; UniProt 1–87

30S ribosomal protein S17

OrganismNot specified

UniProt P0AG63

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS17_ECOLI
Isoform —
PDB entities 4
Chains and sequence ranges Author chain P; PDBConstruct 1–84; UniProt 1–84

30S ribosomal protein S5

OrganismNot specified

UniProt P0A7W1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS5_ECOLI
Isoform —
PDB entities 6
Chains and sequence ranges Author chain k; PDBConstruct 1–167; UniProt 1–167

30S ribosomal protein S4

OrganismNot specified

UniProt P0A7V8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS4_ECOLI
Isoform —
PDB entities 7
Chains and sequence ranges Author chain l; PDBConstruct 1–206; UniProt 1–206

30S ribosomal protein S6, fully modified isoform

OrganismNot specified

UniProt P02358

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS6_ECOLI
Isoform —
PDB entities 8
Chains and sequence ranges Author chain n; PDBConstruct 1–135; UniProt 1–135

30S ribosomal protein S8

OrganismNot specified

UniProt P0A7W7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS8_ECOLI
Isoform —
PDB entities 9
Chains and sequence ranges Author chain p; PDBConstruct 1–130; UniProt 1–130

Small ribosomal subunit protein uS11

OrganismNot specified

UniProt P0A7R9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS11_ECOLI
Isoform —
PDB entities 10
Chains and sequence ranges Author chain q; PDBConstruct 1–129; UniProt 1–129

Small ribosomal subunit protein uS12

OrganismNot specified

UniProt P0A7S3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS12_ECOLI
Isoform —
PDB entities 11
Chains and sequence ranges Author chain t; PDBConstruct 1–124; UniProt 1–124

30S ribosomal protein S15

OrganismNot specified

UniProt P0ADZ4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S16 × 1 (P0A7T3) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS15_ECOLI
Isoform —
PDB entities 12
Chains and sequence ranges Author chain u; PDBConstruct 1–89; UniProt 1–89

30S ribosomal protein S16

OrganismNot specified

UniProt P0A7T3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) Translation initiation factor IF-3 × 1 (C3T7P7) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS16_ECOLI
Isoform —
PDB entities 13
Chains and sequence ranges Author chain y; PDBConstruct 1–82; UniProt 1–82

Translation initiation factor IF-3

Escherichia coli

UniProt C3T7P7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 13 RNA 1 30S ribosomal protein S18 × 1 (P0A7T7) 30S ribosomal protein S21 × 1 (P68679) 30S ribosomal protein S20 × 1 (P0A7U7) 30S ribosomal protein S17 × 1 (P0AG63) 16S ribosomal RNA × 1 30S ribosomal protein S5 × 1 (P0A7W1) 30S ribosomal protein S4 × 1 (P0A7V8) 30S ribosomal protein S6, fully modified isoform × 1 (P02358) 30S ribosomal protein S8 × 1 (P0A7W7) Small ribosomal subunit protein uS11 × 1 (P0A7R9) Small ribosomal subunit protein uS12 × 1 (P0A7S3) 30S ribosomal protein S15 × 1 (P0ADZ4) 30S ribosomal protein S16 × 1 (P0A7T3) Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name C3T7P7_ECOLX
Isoform —
PDB entities 14
Chains and sequence ranges Author chain A; PDBConstruct 1–180; UniProt 1–180

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8jsh
Deposition date deposition_date2023-06-20
Structure title titleStructure of the 30S-body-IF3 complex from Escherichia coli
Keywords keywordsRibosome, 30S, IF3, Translation initiation, TRANSLATION; TRANSLATION
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8jsh__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8jsh__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8jsh__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)58.06 Å
Rg (electron density)59.06 Å
Total Rg59.05 Å
Atom count34331
Residues2506
Excluded volume526220 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8jsh__assembly_1__model_1 tetradecameric (14) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (14)

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7. Citations (1)