|
2L7E
The structure of a domain from yeast
Deposited 2010-12-08
|
Different construct
Different oligomeric state
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–123(123 aa)
Fragment:YEATS domain residues 1-123
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 6.7;298 K;Ionic strength (raw mmCIF value) 0.12;Pressure ambient
NMR sample composition
20 mM sodium phosphate, 100 mM sodium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition
20 mM sodium phosphate, 100 mM sodium chloride, 100% D2O | 100% D2O
|
Resolution not provided
|
|
3QRL
Crystal Structure of the Taf14 YEATS domain
Deposited 2011-02-18
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–137(137 aa)
Fragment:YEATS Domain (UNP Residues 1-137)
|
Not recorded
|
PGE TRIETHYLENE GLYCOL × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.5;298 K;42.5% (v/v) PEG-600, 100 mM Sodium Citrate pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
|
Resolution 1.70 Å
R-free 0.235
|
|
5D7E
Crystal structure of Taf14 YEATS domain in complex with H3K9ac
Deposited 2015-08-13
|
Different construct
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–137(137 aa)
|
Not recorded
|
PEG DI(HYDROXYETHYL)ETHER × 3
MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 5.5;291 K;0.2 M sodium citrate and 48% PEG600 (v/v)
|
Resolution 1.90 Å
R-free 0.218
|
|
5IOK
Crystal structure of Taf14 YEATS domain in complex with histone H3K9cr
Deposited 2016-03-08
|
Different construct
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–137(137 aa)
|
Not recorded
|
PEG DI(HYDROXYETHYL)ETHER × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;291 K;44% PEG600 (v/v) and 0.2 M citric acid (pH 6.0)
|
Resolution 2.22 Å
R-free 0.239
|
|
5SVA
Mediator-RNA Polymerase II Pre-Initiation Complex
Deposited 2016-08-05
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein–DNA
Heteromer;Protein × 38
PDB declaration: 40-meric
|
Chain n
1–244(244 aa)
|
Not recorded
|
ZN ZINC ION × 8
MG MAGNESIUM ION × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 15.30 Å
|
|
6LQZ
Solution structure of Taf14ET-Sth1EBMC
Deposited 2020-01-15
|
Different construct
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
174–244(71 aa)
Fragment:Taf14ET
|
Not recorded
|
No recorded non-water small molecule
|
SOLUTION NMR
NMR measurement conditions
pH 7;298 K;Ionic strength (raw mmCIF value) 100;Pressure 1
NMR sample composition
1 mM [U-100% 13C; U-100% 15N] Taf14ET, 1.5 mM [U-100% 13C; U-100% 15N] Sth1EBMC, 20 mM Phosphate buffer, 100 mM sodium chloride, 1 % v/v inhabitor cocktail, 0.04 % sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O
|
Resolution not provided
|
|
6MIN
Crystal structure of Taf14 YEATS domain G82A mutant in complex with histone H3K9cr
Deposited 2018-09-19
|
Different construct
Different mutation/modification
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–137(137 aa)
Fragment:YEATS domain residues 1-137
|
Mutation:G82A
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;291 K;44% PEG600 (v/v) and 0.2 M citric acid (pH 6.0)
|
Resolution 1.90 Å
R-free 0.256
|
|
6MIO
Crystal structure of Taf14 YEATS domain in complex with histone H3K9pr
Deposited 2018-09-19
|
Different construct
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–137(137 aa)
Fragment:YEATS domain residues 1-137
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;291 K;46% PEG600 (v/v) and 0.2 M citric acid (pH 6.0)
|
Resolution 1.85 Å
R-free 0.232
|
|
6MIP
Crystal structure of Taf14 YEATS domain G82A mutant
Deposited 2018-09-19
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein monomer
Monomer;Protein × 1
PDB declaration: monomeric
|
Chain A
1–137(137 aa)
Fragment:YEATS domain residues 1-137
|
Mutation:G82A
|
PEG DI(HYDROXYETHYL)ETHER × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;298 K;48% PEG600 with 0.2 M sodium citrate (pH 6.0)
|
Resolution 2.00 Å
R-free 0.219
|
|
6MIQ
Crystal structure of Taf14 YEATS domain in complex with histone H3K9bu
Deposited 2018-09-19
|
Different construct
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–137(137 aa)
Fragment:YEATS domain residues 1-137
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;291 K;44% PEG600 (v/v) and 0.2 M citric acid (pH 6.0)
|
Resolution 1.75 Å
R-free 0.218
|
|
7F4A
Crystal structure of Taf14 YEATS domain in complex with H3K9bz peptide
Deposited 2021-06-18
|
Different construct
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
2–137(136 aa)
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 6;289 K;48% PEG 600, 0.04M citric acid
|
Resolution 2.00 Å
R-free 0.204
|
|
7UHE
Taf14 ET domain in complex with C-terminal tail of Taf2
Deposited 2022-03-26
|
Different construct
Different mutation/modification
Different oligomeric state
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain A
168–243(76 aa)
Fragment:ET domain
Chain C
168–243(76 aa)
Fragment:ET domain
|
Not recorded
|
No recorded non-water small molecule
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, SITTING DROP;pH 7;296 K;2.4 M sodium malonate
|
Resolution 1.66 Å
R-free 0.234
|
|
9UUO
The NuA3 histone acetyltransferase complex
Deposited 2025-05-07
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–244(244 aa)
|
Not recorded
|
ZN ZINC ION × 6
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.68 Å
|
|
9UUS
The NuA3 histone acetyltransferase complex bound to acetyl-CoA and H3 tail
Deposited 2025-05-08
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 6
PDB declaration: hexameric
|
Chain E
1–244(244 aa)
|
Not recorded
|
ZN ZINC ION × 5
ACO ACETYL COENZYME *A × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.20 Å
|
|
9VKW
Cryo-EM structure of the NuA3 complex bound to Ace-coenzyme A
Deposited 2025-06-24
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental method
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 5
PDB declaration: pentameric
|
Chain E
1–244(244 aa)
|
Not recorded
|
ZN ZINC ION × 4
ACO ACETYL COENZYME *A × 1
|
ELECTRON MICROSCOPY
cryo-EM buffer
pH 8
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.13 Å
|