5sva

Mediator-RNA Polymerase II Pre-Initiation Complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

DNA-directed RNA polymerase II subunit RPB1

OrganismNot specified

UniProt P04050

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB1_YEAST
Isoform —
PDB entities 1, 37
Chains and sequence ranges Author chain A; PDBConstruct 1–1733; UniProt 1–1733 Author chain k; PDBConstruct 1–25; UniProt 1561–1585

DNA-directed RNA polymerase II subunit RPB2

OrganismNot specified

UniProt P08518

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB2_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–1224; UniProt 1–1224

DNA-directed RNA polymerase II subunit RPB3

OrganismNot specified

UniProt P16370

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB3_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–318; UniProt 1–318

DNA-directed RNA polymerase II subunit RPB4

OrganismNot specified

UniProt P20433

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB4_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–221; UniProt 1–221

DNA-directed RNA polymerases I, II, and III subunit RPABC1

OrganismNot specified

UniProt P20434

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB1_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–215; UniProt 1–215

DNA-directed RNA polymerases I, II, and III subunit RPABC2

OrganismNot specified

UniProt P20435

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB2_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–155; UniProt 1–155

DNA-directed RNA polymerase II subunit RPB7

OrganismNot specified

UniProt P34087

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB7_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–171; UniProt 1–171

DNA-directed RNA polymerases I, II, and III subunit RPABC3

OrganismNot specified

UniProt P20436

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB3_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H; PDBConstruct 1–146; UniProt 1–146

DNA-directed RNA polymerase II subunit RPB9

OrganismNot specified

UniProt P27999

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB9_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain I; PDBConstruct 1–122; UniProt 1–122

DNA-directed RNA polymerases I, II, and III subunit RPABC5

OrganismNot specified

UniProt P22139

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB5_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain J; PDBConstruct 1–70; UniProt 1–70

DNA-directed RNA polymerase II subunit RPB11

OrganismNot specified

UniProt P38902

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPB11_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain K; PDBConstruct 1–120; UniProt 1–120

DNA-directed RNA polymerases I, II, and III subunit RPABC4

OrganismNot specified

UniProt P40422

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB4_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain L; PDBConstruct 1–70; UniProt 1–70

Mediator of RNA polymerase II transcription subunit 6

OrganismNot specified

UniProt P38782

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED6_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain M; PDBConstruct 1–295; UniProt 1–295

Mediator of RNA polymerase II transcription subunit 8

OrganismNot specified

UniProt P38304

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED8_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain N; PDBConstruct 1–223; UniProt 1–223

Mediator of RNA polymerase II transcription subunit 11

OrganismNot specified

UniProt Q99278

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED11_YEAST
Isoform —
PDB entities 15
Chains and sequence ranges Author chain O; PDBConstruct 1–115; UniProt 1–115

Mediator of RNA polymerase II transcription subunit 17

OrganismNot specified

UniProt P32569

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED17_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain P; PDBConstruct 1–687; UniProt 1–687

Mediator of RNA polymerase II transcription subunit 18

OrganismNot specified

UniProt P32585

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED18_YEAST
Isoform —
PDB entities 17
Chains and sequence ranges Author chain Q; PDBConstruct 1–307; UniProt 1–307

Mediator of RNA polymerase II transcription subunit 20

OrganismNot specified

UniProt P34162

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED20_YEAST
Isoform —
PDB entities 18
Chains and sequence ranges Author chain R; PDBConstruct 1–210; UniProt 1–210

Mediator of RNA polymerase II transcription subunit 22

OrganismNot specified

UniProt P32570

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED22_YEAST
Isoform —
PDB entities 19
Chains and sequence ranges Author chain S; PDBConstruct 1–121; UniProt 1–121

Mediator of RNA polymerase II transcription subunit 4

OrganismNot specified

UniProt Q12343

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED4_YEAST
Isoform —
PDB entities 20
Chains and sequence ranges Author chain T; PDBConstruct 1–284; UniProt 1–284

Mediator of RNA polymerase II transcription subunit 7

OrganismNot specified

UniProt Q08278

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED7_YEAST
Isoform —
PDB entities 21
Chains and sequence ranges Author chain U; PDBConstruct 1–222; UniProt 1–222

Mediator of RNA polymerase II transcription subunit 9

OrganismNot specified

UniProt P33308

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED9_YEAST
Isoform —
PDB entities 22
Chains and sequence ranges Author chain V; PDBConstruct 1–149; UniProt 1–149

Mediator of RNA polymerase II transcription subunit 21

OrganismNot specified

UniProt P47822

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED21_YEAST
Isoform —
PDB entities 23
Chains and sequence ranges Author chain W; PDBConstruct 1–140; UniProt 1–140

Mediator of RNA polymerase II transcription subunit 31

OrganismNot specified

UniProt P38633

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MED31_YEAST
Isoform —
PDB entities 24
Chains and sequence ranges Author chain X; PDBConstruct 1–127; UniProt 1–127

DNA repair helicase RAD3

OrganismNot specified

UniProt P06839

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RAD3_YEAST
Isoform —
PDB entities 25
Chains and sequence ranges Author chain Y; PDBConstruct 1–778; UniProt 1–778

DNA repair helicase RAD25

OrganismNot specified

UniProt Q00578

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RAD25_YEAST
Isoform —
PDB entities 26
Chains and sequence ranges Author chain Z; PDBConstruct 1–843; UniProt 1–843

RNA polymerase II transcription factor B subunit 2

OrganismNot specified

UniProt Q02939

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TFB2_YEAST
Isoform —
PDB entities 27
Chains and sequence ranges Author chain a; PDBConstruct 1–513; UniProt 1–513

RNA polymerase II transcription factor B subunit 5

OrganismNot specified

UniProt Q3E7C1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TFB5_YEAST
Isoform —
PDB entities 28
Chains and sequence ranges Author chain b; PDBConstruct 1–72; UniProt 1–72

Transcription initiation factor IIB

Saccharomyces cerevisiae

UniProt P29055

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TF2B_YEAST
Isoform —
PDB entities 29
Chains and sequence ranges Author chain c; PDBConstruct 1–345; UniProt 1–345

Transcription initiation factor IIA large subunit

Saccharomyces cerevisiae

UniProt P32773

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TOA1_YEAST
Isoform —
PDB entities 30
Chains and sequence ranges Author chain d; PDBConstruct 1–286; UniProt 1–286

Transcription initiation factor IIA subunit 2

Saccharomyces cerevisiae

UniProt P32774

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2AG_YEAST
Isoform —
PDB entities 31
Chains and sequence ranges Author chain e; PDBConstruct 1–122; UniProt 1–122

Transcription initiation factor IIF subunit alpha

OrganismNot specified

UniProt P41895

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2FA_YEAST
Isoform —
PDB entities 32
Chains and sequence ranges Author chain f; PDBConstruct 1–735; UniProt 1–735

Transcription initiation factor IIF subunit beta

OrganismNot specified

UniProt P41896

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2FB_YEAST
Isoform —
PDB entities 33
Chains and sequence ranges Author chain g; PDBConstruct 1–400; UniProt 1–400

Transcription initiation factor IIE subunit alpha

Saccharomyces cerevisiae

UniProt P36100

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2EA_YEAST
Isoform —
PDB entities 34
Chains and sequence ranges Author chain h; PDBConstruct 1–482; UniProt 1–482

Transcription initiation factor IIE subunit beta

Saccharomyces cerevisiae

UniProt P36145

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name T2EB_YEAST
Isoform —
PDB entities 35
Chains and sequence ranges Author chain i; PDBConstruct 1–328; UniProt 1–328

TATA-box-binding protein

Saccharomyces cerevisiae

UniProt P13393

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 Transcription initiation factor TFIID subunit 14 × 1 (P35189) ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TBP_YEAST
Isoform —
PDB entities 36
Chains and sequence ranges Author chain j; PDBConstruct 1–240; UniProt 1–240

Transcription initiation factor TFIID subunit 14

OrganismNot specified

UniProt P35189

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–DNA Heteromer Protein 38 DNA 2 DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) DNA-directed RNA polymerase II subunit RPB2 × 1 (P08518) DNA-directed RNA polymerase II subunit RPB3 × 1 (P16370) DNA-directed RNA polymerase II subunit RPB4 × 1 (P20433) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P20434) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P20435) DNA-directed RNA polymerase II subunit RPB7 × 1 (P34087) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P20436) DNA-directed RNA polymerase II subunit RPB9 × 1 (P27999) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P22139) DNA-directed RNA polymerase II subunit RPB11 × 1 (P38902) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P40422) Mediator of RNA polymerase II transcription subunit 6 × 1 (P38782) Mediator of RNA polymerase II transcription subunit 8 × 1 (P38304) Mediator of RNA polymerase II transcription subunit 11 × 1 (Q99278) Mediator of RNA polymerase II transcription subunit 17 × 1 (P32569) Mediator of RNA polymerase II transcription subunit 18 × 1 (P32585) Mediator of RNA polymerase II transcription subunit 20 × 1 (P34162) Mediator of RNA polymerase II transcription subunit 22 × 1 (P32570) Mediator of RNA polymerase II transcription subunit 4 × 1 (Q12343) Mediator of RNA polymerase II transcription subunit 7 × 1 (Q08278) Mediator of RNA polymerase II transcription subunit 9 × 1 (P33308) Mediator of RNA polymerase II transcription subunit 21 × 1 (P47822) Mediator of RNA polymerase II transcription subunit 31 × 1 (P38633) DNA repair helicase RAD3 × 1 (P06839) DNA repair helicase RAD25 × 1 (Q00578) RNA polymerase II transcription factor B subunit 2 × 1 (Q02939) RNA polymerase II transcription factor B subunit 5 × 1 (Q3E7C1) Transcription initiation factor IIB × 1 (P29055) Transcription initiation factor IIA large subunit × 1 (P32773) Transcription initiation factor IIA subunit 2 × 1 (P32774) Transcription initiation factor IIF subunit alpha × 1 (P41895) Transcription initiation factor IIF subunit beta × 1 (P41896) Transcription initiation factor IIE subunit alpha × 1 (P36100) Transcription initiation factor IIE subunit beta × 1 (P36145) TATA-box-binding protein × 1 (P13393) DNA-directed RNA polymerase II subunit RPB1 × 1 (P04050) 108bp HIS4 Promoter Non-template Strand (-92/+16) × 1 108bp HIS4 Promoter Template Strand (+16/-92) × 1 ZINC ION × 8 MAGNESIUM ION × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TAF14_YEAST
Isoform —
PDB entities 40
Chains and sequence ranges Author chain n; PDBConstruct 1–244; UniProt 1–244

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5sva
Deposition date deposition_date2016-08-05
Structure title titleMediator-RNA Polymerase II Pre-Initiation Complex
Keywords keywordsTranscriptional Initiation, Mediator, Pre-Initiation Complex, Carboxy-terminal domain (CTD), TRANSCRIPTION, TRANSFERASE-DNA complex; TRANSCRIPTION, TRANSFERASE/DNA
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5sva__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5sva__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5sva__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)80.63 Å
Rg (electron density)80.51 Å
Total Rg80.38 Å
Atom count66559
Residues8447
Excluded volume1189400 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5sva__assembly_1__model_1 40-meric (40) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (42)

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7. Citations (1)