8z5s

Cryo-EM structure of the proximal rod-export apparatus of the polar flagellar motor

Method: ELECTRON MICROSCOPY
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Flagellar biosynthetic protein FliP

物种未注明

UniProt A0A1W6TTE6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A1W6TTE6_VIBAL
Isoform —
PDB实体 1
链与序列区间 作者链 1; PDB构建体 1–289; UniProt 1–289 作者链 2; PDB构建体 1–289; UniProt 1–289 作者链 3; PDB构建体 1–289; UniProt 1–289 作者链 y; PDB构建体 1–289; UniProt 1–289 作者链 z; PDB构建体 1–289; UniProt 1–289

Flagellar biosynthetic protein FliQ

物种未注明

UniProt A0A0H0YAF4

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0H0YAF4_VIBAL
Isoform —
PDB实体 2
链与序列区间 作者链 4; PDB构建体 1–89; UniProt 1–89 作者链 5; PDB构建体 1–89; UniProt 1–89 作者链 6; PDB构建体 1–89; UniProt 1–89 作者链 7; PDB构建体 1–89; UniProt 1–89

Flagellar basal-body rod protein FlgF

物种未注明

UniProt A0A0G9M4M9

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0G9M4M9_VIBAL
Isoform —
PDB实体 3
链与序列区间 作者链 m; PDB构建体 1–249; UniProt 1–249 作者链 n; PDB构建体 1–249; UniProt 1–249 作者链 o; PDB构建体 1–249; UniProt 1–249 作者链 p; PDB构建体 1–249; UniProt 1–249 作者链 q; PDB构建体 1–249; UniProt 1–249

Flagellar hook-basal body complex protein FliE

物种未注明

UniProt A0A0H0Y9C1

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0H0Y9C1_VIBAL
Isoform —
PDB实体 4
链与序列区间 作者链 r; PDB构建体 1–103; UniProt 1–103 作者链 s; PDB构建体 1–103; UniProt 1–103 作者链 t; PDB构建体 1–103; UniProt 1–103 作者链 u; PDB构建体 1–103; UniProt 1–103 作者链 v; PDB构建体 1–103; UniProt 1–103 作者链 w; PDB构建体 1–103; UniProt 1–103

Flagellar biosynthetic protein FlhB

物种未注明

UniProt A0A0H0YB55

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0H0YB55_VIBAL
Isoform —
PDB实体 5
链与序列区间 作者链 x; PDB构建体 1–376; UniProt 1–376

Flagellar biosynthetic protein FliR

物种未注明

UniProt A0A0H0YFV7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0H0YFV7_VIBAL
Isoform —
PDB实体 6
链与序列区间 作者链 8; PDB构建体 1–260; UniProt 1–260

Flagellar M-ring protein

物种未注明

UniProt Q75N27

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q75N27_VIBAL
Isoform —
PDB实体 7
链与序列区间 作者链 AA; PDB构建体 1–580; UniProt 1–580 作者链 AB; PDB构建体 1–580; UniProt 1–580 作者链 AC; PDB构建体 1–580; UniProt 1–580 作者链 AD; PDB构建体 1–580; UniProt 1–580 作者链 AE; PDB构建体 1–580; UniProt 1–580 作者链 AF; PDB构建体 1–580; UniProt 1–580 作者链 AG; PDB构建体 1–580; UniProt 1–580 作者链 AH; PDB构建体 1–580; UniProt 1–580 作者链 AI; PDB构建体 1–580; UniProt 1–580 作者链 AJ; PDB构建体 1–580; UniProt 1–580 作者链 AK; PDB构建体 1–580; UniProt 1–580 作者链 AL; PDB构建体 1–580; UniProt 1–580 作者链 AM; PDB构建体 1–580; UniProt 1–580 作者链 AN; PDB构建体 1–580; UniProt 1–580 作者链 AO; PDB构建体 1–580; UniProt 1–580

Flagellar basal body rod protein FlgB

物种未注明

UniProt A0A0G9LZG6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal-body rod protein FlgC × 6 (A0A0G9LZH2) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0G9LZG6_VIBAL
Isoform —
PDB实体 8
链与序列区间 作者链 b; PDB构建体 1–131; UniProt 1–131 作者链 c; PDB构建体 1–131; UniProt 1–131 作者链 d; PDB构建体 1–131; UniProt 1–131 作者链 e; PDB构建体 1–131; UniProt 1–131 作者链 f; PDB构建体 1–131; UniProt 1–131

Flagellar basal-body rod protein FlgC

物种未注明

UniProt A0A0G9LZH2

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 48 Flagellar biosynthetic protein FliP × 5 (A0A1W6TTE6) Flagellar biosynthetic protein FliQ × 4 (A0A0H0YAF4) Flagellar basal-body rod protein FlgF × 5 (A0A0G9M4M9) Flagellar hook-basal body complex protein FliE × 6 (A0A0H0Y9C1) Flagellar biosynthetic protein FlhB × 1 (A0A0H0YB55) Flagellar biosynthetic protein FliR × 1 (A0A0H0YFV7) Flagellar M-ring protein × 15 (Q75N27) Flagellar basal body rod protein FlgB × 5 (A0A0G9LZG6) (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE × 4 (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate × 5 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A0G9LZH2_VIBAL
Isoform —
PDB实体 9
链与序列区间 作者链 g; PDB构建体 1–137; UniProt 1–137 作者链 h; PDB构建体 1–137; UniProt 1–137 作者链 i; PDB构建体 1–137; UniProt 1–137 作者链 j; PDB构建体 1–137; UniProt 1–137 作者链 k; PDB构建体 1–137; UniProt 1–137 作者链 l; PDB构建体 1–137; UniProt 1–137

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id8z5s
沉积日期 deposition_date2024-04-18
结构标题 titleCryo-EM structure of the proximal rod-export apparatus of the polar flagellar motor
关键词 keywordsPolar flagellum, Polar flagellar motor, Proximal rod, MOTOR PROTEIN; MOTOR PROTEIN
实验方法 methodELECTRON MICROSCOPY
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

8z5s__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

8z5s__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

8z5s__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)63.80 Å
Rg(电子密度)65.43 Å
总 Rg65.22 Å
原子数38700
残基数5016
排除体积696060 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 8z5s__assembly_1__model_1 48-meric (48) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (11)

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7. 引用文献 (1)