9pl1
Structure of metastable folding intermediate of V17A/V26A ubiquitin derived from pressure-jump NMR data
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9pl1 |
| deposition_date | 2025-07-15 |
| title | Structure of metastable folding intermediate of V17A/V26A ubiquitin derived from pressure-jump NMR data |
| keywords | folding intermediate, retracted strand, SIGNALING PROTEIN; SIGNALING PROTEIN |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.12 Å |
| rg_electron | 11.52 Å |
| i0 | 102699000.00 |
| molecular_weight | 85088.0 kDa |
| excluded_volume | 107090 ų |
| envelope_volume | 16013 ų |
| shell_volume | 10810 ų |
| envelope_diameter | 42.8 Å |
| shell_rg | 18.36 Å |
| envelope_rg | 12.92 Å |
| shape_rg | 11.50 Å |
| total_rg | 11.86 Å |
| total_atoms | 12190 |
| n_residues | 760 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 42.1 Å |
| rg_real | 12.03 Å |
| rg_real_error | 0.42 Å |
| i0_real | 1.0270e+08 |
| i0_real_error | 1.2060e+06 |
| rg_reciprocal | 12.04 Å |
| i0_reciprocal | 102700000.0000 |
| total_estimate | 0.8362 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 16.0 Å |
| skewness | 0.045 |
| kurtosis | -0.231 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 151700.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.624; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.996 |