9r80
;RNA-free stacked-ring (r10) virus-like particle composed of PVA coat protein with 6 mutations (H89Q, E90S, S144E, R163A, K180E, and T210R) ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r80 |
| deposition_date | 2025-05-15 |
| title | ;RNA-free stacked-ring (r10) virus-like particle composed of PVA coat protein with 6 mutations (H89Q, E90S, S144E, R163A, K180E, and T210R) ; |
| keywords | potato virus A, virus-like particle, potyvirus, coat protein, helical, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 64.26 Å |
| rg_electron | 63.24 Å |
| i0 | 5849750000.00 |
| molecular_weight | 643910.0 kDa |
| excluded_volume | 804500 ų |
| envelope_volume | 1387600 ų |
| shell_volume | 174870 ų |
| envelope_diameter | 193.2 Å |
| shell_rg | 75.13 Å |
| envelope_rg | 58.94 Å |
| shape_rg | 63.22 Å |
| total_rg | 63.53 Å |
| total_atoms | 45120 |
| n_residues | 5580 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 191.2 Å |
| rg_real | 63.49 Å |
| rg_real_error | 1.07 Å |
| i0_real | 5.8500e+09 |
| i0_real_error | 1.1060e+08 |
| rg_reciprocal | 64.89 Å |
| i0_reciprocal | 5864000000.0000 |
| total_estimate | 0.8406 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 95.6 Å |
| skewness | -0.238 |
| kurtosis | -0.620 |
| angular_range | — – 0.1200 Å−1 |
| current_alpha | 0.0001 |
| highest_alpha | 1767000000.0000 |
| n_real_points | 25 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.725; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.927; Smooth: 0.821 |