9ryo
Aquifex aeolicus lumazine synthase 11-pentamer cage
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9ryo |
| deposition_date | 2025-07-15 |
| title | Aquifex aeolicus lumazine synthase 11-pentamer cage |
| keywords | protein cage, protein engineering, self-assembly, geometry, pentamer, encapsulation, BIOSYNTHETIC PROTEIN; BIOSYNTHETIC PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 66.10 Å |
| rg_electron | 64.77 Å |
| i0 | 11306300000.00 |
| molecular_weight | 917690.0 kDa |
| excluded_volume | 1156500 ų |
| envelope_volume | 1793600 ų |
| shell_volume | 216740 ų |
| envelope_diameter | 170.4 Å |
| shell_rg | 79.15 Å |
| envelope_rg | 60.47 Å |
| shape_rg | 64.74 Å |
| total_rg | 65.10 Å |
| total_atoms | 64680 |
| n_residues | 8470 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 163.7 Å |
| rg_real | 65.20 Å |
| rg_real_error | 0.33 Å |
| i0_real | 1.1310e+10 |
| i0_real_error | 1.8520e+08 |
| rg_reciprocal | 66.85 Å |
| i0_reciprocal | 11340000000.0000 |
| total_estimate | 0.8409 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 102.3 Å |
| skewness | -0.258 |
| kurtosis | -0.675 |
| angular_range | — – 0.1200 Å−1 |
| current_alpha | 0.0001 |
| highest_alpha | 7043000000.0000 |
| n_real_points | 25 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.982; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.981; Smooth: 0.000 |