9ryp
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9ryp |
| deposition_date | 2025-07-15 |
| title | Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage |
| keywords | protein cage, protein engineering, self-assembly, geometry, pentamer, encapsulation, BIOSYNTHETIC PROTEIN; BIOSYNTHETIC PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 66.12 Å |
| rg_electron | 64.94 Å |
| i0 | 13700900000.00 |
| molecular_weight | 1001600.0 kDa |
| excluded_volume | 1258400 ų |
| envelope_volume | 1939200 ų |
| shell_volume | 233120 ų |
| envelope_diameter | 170.1 Å |
| shell_rg | 79.69 Å |
| envelope_rg | 60.64 Å |
| shape_rg | 64.92 Å |
| total_rg | 65.21 Å |
| total_atoms | 70500 |
| n_residues | 9240 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 163.7 Å |
| rg_real | 65.20 Å |
| rg_real_error | 0.28 Å |
| i0_real | 1.3700e+10 |
| i0_real_error | 2.2050e+08 |
| rg_reciprocal | 66.89 Å |
| i0_reciprocal | 13740000000.0000 |
| total_estimate | 0.8413 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 102.3 Å |
| skewness | -0.252 |
| kurtosis | -0.652 |
| angular_range | — – 0.1200 Å−1 |
| current_alpha | 0.0007 |
| highest_alpha | 10480000000000.0000 |
| n_real_points | 25 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.981; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.000 |