9ryu
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9ryu |
| deposition_date | 2025-07-15 |
| title | Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage |
| keywords | protein cage, protein engineering, self-assembly, geometry, pentamer, encapsulation, BIOSYNTHETIC PROTEIN; BIOSYNTHETIC PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 66.05 Å |
| rg_electron | 64.95 Å |
| i0 | 13945200000.00 |
| molecular_weight | 1004300.0 kDa |
| excluded_volume | 1259400 ų |
| envelope_volume | 1939300 ų |
| shell_volume | 233200 ų |
| envelope_diameter | 170.1 Å |
| shell_rg | 79.70 Å |
| envelope_rg | 60.62 Å |
| shape_rg | 64.92 Å |
| total_rg | 65.23 Å |
| total_atoms | 70680 |
| n_residues | 9240 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 163.6 Å |
| rg_real | 65.13 Å |
| rg_real_error | 0.28 Å |
| i0_real | 1.3950e+10 |
| i0_real_error | 2.0990e+08 |
| rg_reciprocal | 66.82 Å |
| i0_reciprocal | 13990000000.0000 |
| total_estimate | 0.8412 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 102.2 Å |
| skewness | -0.253 |
| kurtosis | -0.652 |
| angular_range | — – 0.1200 Å−1 |
| current_alpha | 0.0003 |
| highest_alpha | 11850000000000.0000 |
| n_real_points | 25 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.981; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.000 |