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9se5

;Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2) ;

Method: ELECTRON MICROSCOPY Dmax: 136.6 Å Quality: REASONABLE

SAXS Profile

SAXS profile for 9se5

P(r) Distribution

P(r) distribution for 9se5
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1. Structure Basics

entry_id9se5
deposition_date2025-08-15
last_revision2025-11-05
title;Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2) ;
keywordsFerlins, otoferlin, multi-C2 domain, MEMBRANE PROTEIN; MEMBRANE PROTEIN
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier40.77 Å
rg_electron40.34 Å
i0430384000.00
molecular_weight169680.0 kDa
excluded_volume212520 ų
envelope_volume303990 ų
shell_volume62662 ų
envelope_diameter142.0 Å
shell_rg46.26 Å
envelope_rg39.55 Å
shape_rg40.36 Å
total_rg40.62 Å
total_atoms11944
n_residues1483
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax136.6 Å
rg_real40.73 Å
rg_real_error0.87 Å
i0_real4.3040e+08
i0_real_error7.5100e+06
rg_reciprocal40.77 Å
i0_reciprocal430400000.0000
total_estimate0.6612
solution_quality REASONABLE a REASONABLE solution
n_peaks1
r_peak_primary49.0 Å
skewness0.288
kurtosis-0.390
angular_range— – 0.1950 Å−1
current_alpha0.0001
highest_alpha49030000.0000
n_real_points40
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.880; Stabil: 1.000; Sysdev: 0.025; Positv: 1.000; Valcen: 0.992; Smooth: 0.885
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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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7. Files & Curves (10)