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9seg

;Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "open" conformation (class 1) ;

Method: ELECTRON MICROSCOPY Dmax: 140.9 Å Quality: GOOD

SAXS Profile

SAXS profile for 9seg

P(r) Distribution

P(r) distribution for 9seg
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1. Structure Basics

entry_id9seg
deposition_date2025-08-18
last_revision2025-11-05
title;Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "open" conformation (class 1) ;
keywordsFerlin, otoferlin, multi-C2 domain, Ca2+-binding, membrane fusion, MEMBRANE PROTEIN; MEMBRANE PROTEIN
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier41.47 Å
rg_electron41.18 Å
i0433698000.00
molecular_weight170210.0 kDa
excluded_volume213120 ų
envelope_volume304830 ų
shell_volume62429 ų
envelope_diameter147.6 Å
shell_rg46.15 Å
envelope_rg40.39 Å
shape_rg41.20 Å
total_rg41.41 Å
total_atoms11977
n_residues1489
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax140.9 Å
rg_real41.51 Å
rg_real_error1.28 Å
i0_real4.3370e+08
i0_real_error8.1300e+06
rg_reciprocal41.47 Å
i0_reciprocal433700000.0000
total_estimate0.8745
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary48.2 Å
skewness0.378
kurtosis-0.265
angular_range— – 0.1900 Å−1
current_alpha0.0000
highest_alpha44150000.0000
n_real_points39
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.850; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.814
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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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7. Files & Curves (10)