9vff
Solution structure of XPC binding domain of a hHR23B variant - H274N/H323Q
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vff |
| deposition_date | 2025-06-11 |
| last_revision | 2025-10-01 |
| title | Solution structure of XPC binding domain of a hHR23B variant - H274N/H323Q |
| keywords | metal-binding dead mutant, METAL BINDING PROTEIN; METAL BINDING PROTEIN |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 11.62 Å |
| rg_electron | 10.99 Å |
| i0 | 102755000.00 |
| molecular_weight | 80140.0 kDa |
| excluded_volume | 98613 ų |
| envelope_volume | 13393 ų |
| shell_volume | 9681 ų |
| envelope_diameter | 39.1 Å |
| shell_rg | 17.54 Å |
| envelope_rg | 12.20 Å |
| shape_rg | 11.00 Å |
| total_rg | 11.23 Å |
| total_atoms | 11150 |
| n_residues | 720 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 36.7 Å |
| rg_real | 11.53 Å |
| rg_real_error | 0.32 Å |
| i0_real | 1.0280e+08 |
| i0_real_error | 1.0920e+06 |
| rg_reciprocal | 11.53 Å |
| i0_reciprocal | 102800000.0000 |
| total_estimate | 0.8861 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 15.8 Å |
| skewness | 0.004 |
| kurtosis | -0.401 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 70240.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.853; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.994; Smooth: 0.966 |