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9vft

Structure of mature CVA6 virus complexed with 3H7 Fab

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Genome polyprotein

OrganismNot specified

UniProt E3VJS6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 360 VH × 60 VL × 60 Genome polyprotein × 60 （A0A7D0TR32） Genome polyprotein × 60 （A0A4P2SK07） Genome polyprotein × 60 （A0A222NWY2） STEARIC ACID × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （A0A7D0TR32） Genome polyprotein × 1 （A0A4P2SK07） Genome polyprotein × 1 （A0A222NWY2） STEARIC ACID × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 30 VH × 5 VL × 5 Genome polyprotein × 5 （A0A7D0TR32） Genome polyprotein × 5 （A0A4P2SK07） Genome polyprotein × 5 （A0A222NWY2） STEARIC ACID × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 36 VH × 6 VL × 6 Genome polyprotein × 6 （A0A7D0TR32） Genome polyprotein × 6 （A0A4P2SK07） Genome polyprotein × 6 （A0A222NWY2） STEARIC ACID × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （A0A7D0TR32） Genome polyprotein × 1 （A0A4P2SK07） Genome polyprotein × 1 （A0A222NWY2） STEARIC ACID × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9vfq 9vfr 9vfr 9vfr 9vfr 9vfr 9vft 9vft 9vft 9vft 9vft 9vfu

12 assemblies

View Construct and Data Evidence
UniProt name E3VJS6_9ENTO
Isoform —
PDB entities 3
Chains and sequence ranges Author chain D； PDBConstruct 1–69； UniProt 1–69

Genome polyprotein

OrganismNot specified

UniProt A0A7D0TR32

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 360 VH × 60 VL × 60 Genome polyprotein × 60 （E3VJS6） Genome polyprotein × 60 （A0A4P2SK07） Genome polyprotein × 60 （A0A222NWY2） STEARIC ACID × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （E3VJS6） Genome polyprotein × 1 （A0A4P2SK07） Genome polyprotein × 1 （A0A222NWY2） STEARIC ACID × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 30 VH × 5 VL × 5 Genome polyprotein × 5 （E3VJS6） Genome polyprotein × 5 （A0A4P2SK07） Genome polyprotein × 5 （A0A222NWY2） STEARIC ACID × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 36 VH × 6 VL × 6 Genome polyprotein × 6 （E3VJS6） Genome polyprotein × 6 （A0A4P2SK07） Genome polyprotein × 6 （A0A222NWY2） STEARIC ACID × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （E3VJS6） Genome polyprotein × 1 （A0A4P2SK07） Genome polyprotein × 1 （A0A222NWY2） STEARIC ACID × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9vfp 9vfq 9vfr 9vfr 9vfr 9vfr 9vfr 9vfs 9vft 9vft 9vft 9vft

15 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name A0A7D0TR32_9ENTO
Isoform —
PDB entities 4
Chains and sequence ranges Author chain B； PDBConstruct 1–256； UniProt 70–325

Genome polyprotein

OrganismNot specified

UniProt A0A4P2SK07

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 360 VH × 60 VL × 60 Genome polyprotein × 60 （E3VJS6） Genome polyprotein × 60 （A0A7D0TR32） Genome polyprotein × 60 （A0A222NWY2） STEARIC ACID × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （E3VJS6） Genome polyprotein × 1 （A0A7D0TR32） Genome polyprotein × 1 （A0A222NWY2） STEARIC ACID × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 30 VH × 5 VL × 5 Genome polyprotein × 5 （E3VJS6） Genome polyprotein × 5 （A0A7D0TR32） Genome polyprotein × 5 （A0A222NWY2） STEARIC ACID × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 36 VH × 6 VL × 6 Genome polyprotein × 6 （E3VJS6） Genome polyprotein × 6 （A0A7D0TR32） Genome polyprotein × 6 （A0A222NWY2） STEARIC ACID × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （E3VJS6） Genome polyprotein × 1 （A0A7D0TR32） Genome polyprotein × 1 （A0A222NWY2） STEARIC ACID × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9vfp 9vfq 9vfr 9vfr 9vfr 9vfr 9vfr 9vfs 9vft 9vft 9vft 9vft

15 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name A0A4P2SK07_9ENTO
Isoform —
PDB entities 5
Chains and sequence ranges Author chain C； PDBConstruct 1–240； UniProt 326–565

Genome polyprotein

OrganismNot specified

UniProt A0A222NWY2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 360 VH × 60 VL × 60 Genome polyprotein × 60 （E3VJS6） Genome polyprotein × 60 （A0A7D0TR32） Genome polyprotein × 60 （A0A4P2SK07） STEARIC ACID × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （E3VJS6） Genome polyprotein × 1 （A0A7D0TR32） Genome polyprotein × 1 （A0A4P2SK07） STEARIC ACID × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 30 VH × 5 VL × 5 Genome polyprotein × 5 （E3VJS6） Genome polyprotein × 5 （A0A7D0TR32） Genome polyprotein × 5 （A0A4P2SK07） STEARIC ACID × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 36 VH × 6 VL × 6 Genome polyprotein × 6 （E3VJS6） Genome polyprotein × 6 （A0A7D0TR32） Genome polyprotein × 6 （A0A4P2SK07） STEARIC ACID × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 6 VH × 1 VL × 1 Genome polyprotein × 1 （E3VJS6） Genome polyprotein × 1 （A0A7D0TR32） Genome polyprotein × 1 （A0A4P2SK07） STEARIC ACID × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9vfp 9vfq 9vfr 9vfr 9vfr 9vfr 9vfr 9vfs 9vft 9vft 9vft 9vft

15 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name A0A222NWY2_9ENTO
Isoform —
PDB entities 6
Chains and sequence ranges Author chain A； PDBConstruct 1–305； UniProt 1–305

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9vft
Deposition date deposition_date2025-06-11
Structure title titleStructure of mature CVA6 virus complexed with 3H7 Fab
Keywords keywordscoxsackievirus A6, KRM1, receptor, VIRUS; VIRUS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9vft__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9vft__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9vft__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)141.00 Å
Total Rg141.00 Å
Atom count457920
Residues63180
Excluded volume8088300 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9vft__assembly_1__model_1 360-meric （360） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 9vft__assembly_2__model_1 hexameric （6） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 9vft__assembly_3__model_1 30-meric （30） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 9vft__assembly_4__model_1 36-meric （36） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 9vft__assembly_5__model_1 hexameric （6） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (7)

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7. Citations (1)