← Back to search
9y44

Structure of naked mole-rat ribosome (rotated, tRNAs, and mRNA)

Method: ELECTRON MICROSCOPY Dmax: 237.1 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9y44

P(r) Distribution

P(r) distribution for 9y44

1. Structure Basics

entry_id9y44
deposition_date2025-09-02
titleStructure of naked mole-rat ribosome (rotated, tRNAs, and mRNA)
keywordsNaked mole rat ribosome, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier92.85
rg_electron93.85
i0303890000000.00
molecular_weight3240900.0 kDa
excluded_volume3450800 ų
envelope_volume5549500 ų
shell_volume445900 ų
envelope_diameter314.5
shell_rg110.60
envelope_rg93.08
shape_rg93.87
total_rg93.85
total_atoms219171
n_residues17536
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax237.1
rg_real90.22
rg_real_error0.35
i0_real2.9090e+11
i0_real_error4.7510e+09
rg_reciprocal94.59
i0_reciprocal305600000000.0000
total_estimate0.9119
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary111.6
skewness0.104
kurtosis-0.605
angular_range— – 0.0850 −1
current_alpha0.8042
highest_alpha18860000000.0000
n_real_points18
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.998; Stabil: 0.963; Sysdev: 1.000; Positv: 1.000; Valcen: 0.976; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (88)

6. Citations (1)

7. Files & Curves (10)