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9zrg

Structure of naked mole-rat ribosome (non-rotated)

Method: ELECTRON MICROSCOPY Dmax: 239.5 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9zrg

P(r) Distribution

P(r) distribution for 9zrg
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1. Structure Basics

entry_id9zrg
deposition_date2025-12-19
titleStructure of naked mole-rat ribosome (non-rotated)
keywordsNaked mole rat ribosome, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier93.79 Å
rg_electron94.65 Å
i0302270000000.00
molecular_weight3242200.0 kDa
excluded_volume3458800 ų
envelope_volume5770100 ų
shell_volume456570 ų
envelope_diameter323.7 Å
shell_rg112.40 Å
envelope_rg94.64 Å
shape_rg94.64 Å
total_rg94.72 Å
total_atoms219292
n_residues17656
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax239.5 Å
rg_real91.11 Å
rg_real_error0.35 Å
i0_real2.8930e+11
i0_real_error4.5750e+09
rg_reciprocal95.49 Å
i0_reciprocal304000000000.0000
total_estimate0.9124
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary112.7 Å
skewness0.108
kurtosis-0.612
angular_range— – 0.0850 Å−1
current_alpha0.8250
highest_alpha17780000000.0000
n_real_points18
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.999; Stabil: 0.966; Sysdev: 1.000; Positv: 1.000; Valcen: 0.975; Smooth: 0.000
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4. Crystallography & Experiment

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5. Entities & Polymer Info (81)

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6. Citations (2)

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7. Files & Curves (10)