9yhj
Crystal structure of Chikungunya virus nsP3 macrodomain N24A D31H double mutant (P31 crystal form) in complex with ADP-ribose
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9yhj |
| deposition_date | 2025-09-30 |
| last_revision | 2025-11-26 |
| title | Crystal structure of Chikungunya virus nsP3 macrodomain N24A D31H double mutant (P31 crystal form) in complex with ADP-ribose |
| keywords | Chikungunya virus, ADP-ribose, AViDD, Advanced Light Source 8.3.1, VIRAL PROTEIN, HYDROLASE; VIRAL PROTEIN,HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 30.37 Å |
| rg_electron | 29.60 Å |
| i0 | 94585800.00 |
| molecular_weight | 73008.0 kDa |
| excluded_volume | 89918 ų |
| envelope_volume | 115530 ų |
| shell_volume | 33177 ų |
| envelope_diameter | 107.6 Å |
| shell_rg | 36.15 Å |
| envelope_rg | 29.23 Å |
| shape_rg | 29.60 Å |
| total_rg | 30.18 Å |
| total_atoms | 10106 |
| n_residues | 645 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 101.8 Å |
| rg_real | 30.28 Å |
| rg_real_error | 0.85 Å |
| i0_real | 9.4590e+07 |
| i0_real_error | 1.2470e+06 |
| rg_reciprocal | 30.32 Å |
| i0_reciprocal | 94590000.0000 |
| total_estimate | 0.6982 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 1 |
| r_peak_primary | 43.1 Å |
| skewness | 0.169 |
| kurtosis | -0.532 |
| angular_range | — – 0.2600 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 36870000.0000 |
| n_real_points | 53 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.844; Stabil: 1.000; Sysdev: 0.193; Positv: 1.000; Valcen: 0.968; Smooth: 0.993 |