Structure C-terminal human Mesothelin Peptide bound to MSLNB703 Fab

entry_id	9z3b
deposition_date	2025-11-06
title	Structure C-terminal human Mesothelin Peptide bound to MSLNB703 Fab
keywords	Mesothelin Antibody, ANTITUMOR PROTEIN-IMMUNE SYSTEM complex; ANTITUMOR PROTEIN/IMMUNE SYSTEM
method	X-RAY DIFFRACTION

rg_guinier	39.63 Å
rg_electron	38.93 Å
i0	566492000.00
molecular_weight	190510.0 kDa
excluded_volume	236260 ų
envelope_volume	312160 ų
shell_volume	65621 ų
envelope_diameter	131.8 Å
shell_rg	45.92 Å
envelope_rg	38.02 Å
shape_rg	38.94 Å
total_rg	39.27 Å
total_atoms	13451
n_residues	1818
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	126.0 Å
rg_real	39.40 Å
rg_real_error	0.89 Å
i0_real	5.6650e+08
i0_real_error	9.0340e+06
rg_reciprocal	39.55 Å
i0_reciprocal	566600000.0000
total_estimate	0.8951
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	47.2 Å
skewness	0.163
kurtosis	-0.482
angular_range	— – 0.2000 Å−1
current_alpha	0.0000
highest_alpha	46700000.0000
n_real_points	41
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.914; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.990; Smooth: 0.902

Unit Cell

length_a	60.151 Å
length_b	79.744 Å
length_c	86.774 Å
angle_alpha	77.18 °
angle_beta	89.73 °
angle_gamma	89.84 °
z_pdb	4

Symmetry

space_group	P 1
int_tables_number	1
crystal_system	—

Refinement

resolution	1.960 Å
resolution_low	44.210 Å
r_factor	0.2294
r_work	0.2268
r_free	0.2775

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/z3/9z3b/pr_distribution.json
• pr_output /app/data/pr_computation/z3/9z3b/9z3b.pr.out
• pr_plot /app/data/visualization/pr_computation/z3/9z3b/9z3b_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/z3/9z3b/9z3b.dat
• saxs_fit /app/data/saxs_computation/z3/9z3b/9z3b.fit
• saxs_log /app/data/saxs_computation/z3/9z3b/9z3b.log
• saxs_plot /app/data/visualization/saxs_computation/z3/9z3b/9z3b_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/z3/9z3b/9z3b.fit
pddf	/app/data/pr_computation/z3/9z3b/9z3b.pr.out
profile	/app/data/saxs_computation/z3/9z3b/9z3b.dat