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9zng

Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriD

Method: ELECTRON MICROSCOPY Dmax: 295.2 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9zng

P(r) Distribution

P(r) distribution for 9zng

1. Structure Basics

entry_id9zng
deposition_date2025-12-12
titleCryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriD
keywordsRibosome, Hibernation, Archaea; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier83.78
rg_electron85.11
i0148058000000.00
molecular_weight2209300.0 kDa
excluded_volume2320000 ų
envelope_volume3826500 ų
shell_volume346050 ų
envelope_diameter274.0
shell_rg98.07
envelope_rg83.28
shape_rg85.20
total_rg84.97
total_atoms148943
n_residues11578
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax295.2
rg_real86.40
rg_real_error1.71
i0_real1.4730e+11
i0_real_error3.1360e+09
rg_reciprocal84.97
i0_reciprocal148600000000.0000
total_estimate0.9084
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary108.8
skewness0.392
kurtosis0.018
angular_range— – 0.0950 −1
current_alpha1.1470
highest_alpha8661000000.0000
n_real_points20
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.797; Stabil: 0.900; Sysdev: 1.000; Positv: 1.000; Valcen: 0.969; Smooth: 0.765

4. Crystallography & Experiment

5. Entities & Polymer Info (64)

6. Citations (1)

7. Files & Curves (10)