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9zvm

Dimer structure of Thlaspi arvense plastid biotin carboxylase

Method: ELECTRON MICROSCOPY D_max: 123.2 Å Quality: GOOD

SAXS Profile

P(r) Distribution

P(r) distribution for 9zvm

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1. Structure Basics

entry_id	9zvm
deposition_date	2025-12-30
title	Dimer structure of Thlaspi arvense plastid biotin carboxylase
keywords	ligase, homodimer, carboxylase; LIGASE
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	33.42 Å
rg_electron	32.97 Å
i0	156894000.00
molecular_weight	99086.0 kDa
excluded_volume	124020 Å³
envelope_volume	168790 Å³
shell_volume	43809 Å³
envelope_diameter	130.1 Å
shell_rg	38.31 Å
envelope_rg	33.54 Å
shape_rg	32.97 Å
total_rg	33.41 Å
total_atoms	13924
n_residues	898
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	123.2 Å
rg_real	33.59 Å
rg_real_error	1.03 Å
i0_real	1.5690e+08
i0_real_error	2.6620e+06
rg_reciprocal	33.49 Å
i0_reciprocal	156900000.0000
total_estimate	0.8116
solution_quality	GOOD a GOOD solution
n_peaks	3
r_peak_primary	36.7 Å
skewness	0.627
kurtosis	0.316
angular_range	— – 0.2350 Å⁻¹
current_alpha	0.0000
highest_alpha	36980000.0000
n_real_points	48
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.591; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.839; Smooth: 0.934

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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (2)

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7. Files & Curves (10)